Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq2471 168 2e-37 >seq2471 Length=3256 Score = 168 bits (186), Expect = 2e-37 Identities = 424/629 (67%), Gaps = 18/629 (3%) Strand=Plus/Minus Query 37823 GAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTG 37882 |||||| | ||||| | | ||| || ||| |||||||| | | ||||| ||||| Sbjct 2805 GAACTGATCTGGTTCCTGAGCGGCTCGACCAACATCCGCTATCTCAACGAGAACGGCGTC 2746 Query 37883 ACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAA 37942 ||||| ||||| |||||||| ||||| |||||| ||||||||| | |||||| ||| Sbjct 2745 ACGATCTGGGACGAGTGGGCCGACGAGGCCGGCGAACTCGGCCCGGTCTACGGCAAGCAG 2686 Query 37943 TGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGC--ATGGGTTGTCG 38000 |||||| | ||| |||| || |||||| ||||||| |||| || || || Sbjct 2685 TGGCGCGCCTGGGAGGGTGCCGACGGGGTGGTGCACGACCAGCTCGCCGATCTCGTGACG 2626 Query 38001 AAGAGATCAA-ACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCA 38059 | |||| || || || | | | || ||||||||| | | | ||||| || | Sbjct 2625 --GCGATCCGCACCAACCCCACCT-CGCGGCGGCTGCTGTTCACGGGCTGGAACGTCGGC 2569 Query 38060 GAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAAC 38119 || | | | ||| ||||||||| || || ||| |||| ||| |||||| | Sbjct 2568 GAGCTCGGCCGCATGGCGCTGCCGCCCTGCCACATGACCTACCAGTACTACGTCGCCGAG 2509 Query 38120 GGCCGGTTGTCATGCATGTGGCAG---CAGCGCTCCGTTGATACGTTTTTAGGGTTGCCG 38176 |||||| | || || | || | |||||||| | || || || | || | Sbjct 2508 GGCCGGCT--CA-GCGGGGCGCTGTACCAGCGCTCGGCCGACACCTTCCTCGGCCTCGGC 2452 Query 38177 TTTAACATCGC-GAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGA 38235 | |||||||| ||| | |||||| ||| || ||| | || || || ||| | || Sbjct 2451 TGGAACATCGCCGAGGCA-GCGCTGCTGATCCACATGCTGGCGCAGCAGACCGATCTCGA 2393 Query 38236 TGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACA 38295 ||||| |||||| | | ||||| |||| ||| | ||| ||||| | || || Sbjct 2392 CGTCGGCGAACTCGTCTGGTTCGGCGCCGACACGCATCTCTACGTCAATCACATCGAGCA 2333 Query 38296 AGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGT-GCTGAAACGGA 38354 ||||| |||||||| |||||||||||| ||| | ||| || ||| | | || | Sbjct 2332 GGCGAAGCTGCAGCTCGAGCGCGAGCCGCGGCCGTTCCCG-CGCCTGTCGATCCGTCGCA 2274 Query 38355 AGCC-GCCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCG 38413 |||| |||| | |||| ||| | ||||| ||||| || ||||||||||||||||| Sbjct 2273 AGCCGGCCGAC-CTCTTCAGCTACGCCTACGAGGACTTCGAGCTCGTCGGCTACGATCCG 2215 Query 38414 CATCCGGCGATTAAAGCACCGGTGGCGGT 38442 || ||| ||| || || |||||||| Sbjct 2214 CACCCGAACATTCCCGCCCCCGTGGCGGT 2186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130614829346250