Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3654 123 2e-23 seq2367 98.7 8e-16 >seq3654 Length=3311 Score = 123 bits (136), Expect = 2e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 66323 TCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 ||||| || || || ||| || |||||| ||||||||| | ||||| ||||| || Sbjct 1409 TCCTGCTCCACTCGCTTCATGAACAGATCATTGATCCAGAGGCCATAGAACAGATCACGG 1468 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || | |||||| ||||||| || ||||||| ||| ||||| ||||||||||| || Sbjct 1469 GCACGGTTCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGTCAAAGATGTCTGCG 1528 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 ||||| || || | ||||||||||| | ||| | || ||||| || || || Sbjct 1529 TGCCAGGGCTCAATATAGATGGCGAAGGCACCCTTGCGCTTGCCACCGCCCTG 1581 Score = 122 bits (134), Expect = 7e-23 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 ||||||| || ||||||| ||||| | |||||| || || |||| || || ||| Sbjct 901 CACAAACCGTGGTAGGGCAATGGATGCCAAGTTGCACACCGCAGTCTCATCTGGGCTGGT 960 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||| ||||| || |||||||| || ||||| || ||||||| ||||| || || Sbjct 961 GTACTCCACAATCTCAGTGCACAGGTTGCTGCACTTGATTGTGCCCAGGTTCTGCTGGTT 1020 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171 || ||||| ||||| ||||||||||||| |||||| || | || || |||| || | Sbjct 1021 GCTTTTGCGGTTGCAAGCATCCTTGTACAGCATGTAGGGGTTTCCTGTTTCAATCTGTGC 1080 Query 66172 CTCAA 66176 ||||| Sbjct 1081 CTCAA 1085 >seq2367 Length=7310 Score = 98.7 bits (108), Expect = 8e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482 |||| ||| |||||| || |||| ||||| || |||||||||||||| ||| ||| Sbjct 353 TTGACAACTGTGAACTCTCCAGACAACACACGGCGCACATAGATGTTGGATGTGTAGGGC 294 Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542 |||||| | || ||||||| || || ||| || || || ||||| || || || Sbjct 293 TCAAAGCACTCGTTGTTGCCCAGGATCTGGCTGGTGCTGGCTGTGGGCATCGGGGCAACA 234 Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCA 65601 | || |||||| || | |||| | | ||||| | ||||| ||| ||||||||||| Sbjct 233 AGCAGTGAGTTGCGGACACCGTGCTGCTTGATGTTCTCACGCAGTTCATCCCAGTTCCA 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397489384034000