Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq2471 113 7e-20 >seq2471 Length=3256 Score = 113 bits (124), Expect = 7e-20 Identities = 176/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 196122 CTGACCGTACCGGCACAGGCACTACGTC-CTATCTCGGC-GCACAGATGCGCTTCGATCT 196179 ||||||| |||||||| ||||| || || | ||||| |||| | ||||||||||||| Sbjct 2921 CTGACCGGACCGGCACGGGCACGCGATCGCTGT-TCGGCCGCAC-GCTGCGCTTCGATCT 2864 Query 196180 GCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTG-CGTTCCATCATTCATG 196238 | ||||| ||||||||| |||| |||||| || |||| || | | Sbjct 2863 CCGCGACGGCTTCCCGCTGCTCACGACGAAGCGGATCT-TCTGGCGCGGCGCGGCGACGG 2805 Query 196239 AACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCT 196298 ||||| | |||||||| | ||| ||||||||| || || || || ||||| ||| Sbjct 2804 AACTGATCTGGTTCCTGAGCGGCTCGACCAACATCCGCTATCTCAACGAGAACGGCGTCA 2745 Query 196299 CTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGT 196358 | |||||| |||||||||| |||| ||| | || || ||||| ||||| ||||||| Sbjct 2744 CGATCTGGGACGAGTGGGCCGACGAGGCCGGCGAACTCGGCCCGGTCTACGGCAAGCAGT 2685 Query 196359 GGCG 196362 |||| Sbjct 2684 GGCG 2681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771385921557000