Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coelastrella_20sp._20M60_20[genbank_20GCA_5F001630525.1_202016-04- 25] 16,225 sequences; 80,221,759 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq14742 585 3e-162 >seq14742 Length=52551 Score = 585 bits (648), Expect = 3e-162 Identities = 746/1022 (73%), Gaps = 4/1022 (0%) Strand=Plus/Plus Query 163884 TGGTTCGATGTCCTGGACGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCT 163943 ||||| |||| | || |||||| | | ||| || ||||| ||||| |||||||| Sbjct 37759 TGGTTTGATGACGCAGATGACTGGTTACGTCAAGACCGTTTTGTATTTGTAGGTTGGTCA 37818 Query 163944 GGATTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGTACAACG 164003 || | |||||||| || ||||||| ||||| |||| || ||| ||||||||||||| Sbjct 37819 GGTCTTCTTCTTTTCCCTTGTGCTTATTTTGCACTTGGAGGTTGGTTTACTGGTACAACT 37878 Query 164004 TTTGTTACCAGTTGGTACACCCACGGTCTCGCGTCTAGTTACCTTGAGGGTGCTAATTTC 164063 ||||| || |||||||| || ||| | || ||| || | || ||| ||| ||| Sbjct 37879 TTTGTAACATCATGGTACACACATGGTTTAGCTTCTTCATATTTAGAAGGTTGTAACTTC 37938 Query 164064 CTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT-TG 164122 | ||||| ||||| ||||| ||||| | ||||| ||| ||| || || | ||| || Sbjct 37939 TTAACAGCAGCTGTTTCAACTCCTGCAAACAGTATGGCTCACTCT-TTATTATTCTTATG 37997 Query 164123 GGGTCCTGAGTCTCAGGGGGACTTCATTAGGTGGTGCCAACTTGGGGGACTCTGGGCTTT 164182 ||| ||||| | || || ||||| | | | ||||| ||| | || || || ||| | || Sbjct 37998 GGGACCTGAAGCACAAGGTGACTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACATT 38057 Query 164183 TGTGGCGTTCCACGGATCTTTCGCTCTGATCGGTTTCATGCTTCGGCAGTTTGAAATTGC 164242 | | || || || |||||||||| | | || || || ||| | || || ||||||||||| Sbjct 38058 TATTGCTTTACATGGATCTTTCGGTTTAATTGGATTTATGTTACGTCAATTTGAAATTGC 38117 Query 164243 ACGTCTTGTAGGTATCCGTCCGTACAATGCTATTGCGTTCTCTGGTCCGATTGCTGTCTT 164302 ||| || | | ||||| |||||||||||||| ||||| | || ||| | || || Sbjct 38118 TCGTTCAGTTAATTTACGTCCATACAATGCTATTGCTTTCTCGGCGCCTATTTCAGTTTT 38177 Query 164303 TGTCAGCGTTTTCCTTATGTACCCTCTCGGGCAATCTAGTTGGTTCTTTGCCCCCTCGTT 164362 ||| |||||| | || ||||| | || |||||| | ||||| ||||| || || Sbjct 38178 TGTTTCAGTTTTCTTAATTTACCCATTAGGACAATCTGGCTGGTTTTTTGCTCCTAGTTT 38237 Query 164363 TGGGGTCGCGGCGATCTTCAGATTCCTCTTGTTCCTCCAAGGTTTCCATAACTGGACACT 164422 ||| || || || || ||| | ||| | || || ||||||| |||||||||||||| | Sbjct 38238 TGGTGTAGCAGCTATTTTCCGTTTCATTTTATTTTTCCAAGGCTTCCATAACTGGACTTT 38297 Query 164423 CAACCCCTTCCATATGATGGGTGTTGCAGGCATCCTTGGTGGTGCTCTTCTCTGTGCTAT 164482 ||||| ||||| ||||||||||| ||||| | | || | |||||| | |||||||| Sbjct 38298 AAACCCATTCCACATGATGGGTGTAGCAGGTGTTTTAGGAGCTGCTCTATTATGTGCTAT 38357 Query 164483 TCATGGTGCTACCGTAGAGAATACTTTGTTTGAAGATGGTGAACAATCAAATACTTTCAA 164542 ||| |||||||| || || || || || |||||||||||||| | || || ||| Sbjct 38358 TCACGGTGCTACTGTTGAAAACACATTATTTGAAGATGGTGACGGTGCTAACACATTCCG 38417 Query 164543 GGCATTCGAGCCTACTCAAGAGGAAGAGACTTACTCGATGGTCACTGCCAACCGCTTCTG 164602 ||||| | || || |||| ||||| |||||||| ||||| || || ||||| ||||| Sbjct 38418 TGCATTTAACCCAACACAAGCTGAAGAAACTTACTCAATGGTAACAGCGAACCGTTTCTG 38477 Query 164603 GTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTCTT 164662 |||||| |||||||| |||||||| ||||| |||||| | |||||||| ||||| | Sbjct 38478 GTCTCAAATTTTTGGGGTTGCTTTCTCAAATAAACGTTGGCTTCACTTCTTCATGCTTCT 38537 Query 164663 TGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAATCT 164722 ||||||||| | || ||||||| |||||||| | | || | || | ||| | Sbjct 38538 TGTTCCTGTTGTAGGTCTTTGGATGTCAGCTATTGGTGTAGTTGGGTTAGCTTTAAATTT 38597 Query 164723 TCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGAGAC 164782 ||||||||||| || || || || || ||| | ||||| |||||||| ||||| || || Sbjct 38598 ACGTGCTTATGACTTCGTTTCACAAGAAATTCGTGCAGCTGAGGATCCGGAATTCGAAAC 38657 Query 164783 GTTCTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 164842 ||||| || || || || | | |||||||| ||||||| ||||||||| | ||| Sbjct 38658 TTTCTACACAAAAAATATTATTTTAAATGAAGGTATCCGTGCTTGGATGGCTGCGCAAGA 38717 Query 164843 CCAGCCACACGAATCGT-TTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACTCT 164901 ||| ||||| ||| ||| ||||||| || || ||||| | || | ||||| || || | Sbjct 38718 CCAACCACATGAA-CGTCTTGTATTCCCTGAAGAAGTATTACCTCGTGGTAATGCTCTAT 38776 Query 164902 AA 164903 || Sbjct 38777 AA 38778 Score = 325 bits (360), Expect = 4e-84 Identities = 281/348 (81%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 161076 GTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGT 161135 || ||||| || || |||||||| || |||||||| ||||||||||| |||||||||||| Sbjct 9281 GTTTTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACATGTTAGGTGTTGCTGGT 9222 Query 161136 GTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTT 161195 || || |||||||| | ||||| |||||||| |||||| | || ||||| || | | Sbjct 9221 GTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCATTAGTAACTTCATCTTTAATC 9162 Query 161196 CGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAG 161255 |||||||| ||||| ||||| || ||| | || ||||| || |||||||||||||| Sbjct 9161 CGTGAAACTACTGAAAACGAATCTGCTAACGAAGGATACAAATTCGGTCAAGAAGAAGAA 9102 Query 161256 ACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCC 161315 || |||||||| || ||||| ||||||||||| || || | ||||||||||||||||| Sbjct 9101 ACATACAACATTGTAGCTGCACATGGTTACTTTGGACGTTTAATCTTCCAATACGCTTCT 9042 Query 161316 TTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGG 161375 ||||||||||| ||||| || ||||||||| | || || ||||| || || ||||| ||| Sbjct 9041 TTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTAGTTGGTATTTGG 8982 Query 161376 TTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTC 161423 |||||||| | ||| | || || |||||||||||| | ||||||||| Sbjct 8981 TTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAACGGATTC 8934 Score = 271 bits (300), Expect = 9e-68 Identities = 291/382 (76%), Gaps = 2/382 (1%) Strand=Plus/Minus Query 160562 TTGGGAACAATTCTGCGAGTGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTT 160621 ||||| || || || || ||| | ||| ||| | || ||| | ||| |||||||||| Sbjct 12281 TTGGGCACGTTTTTGTGAATGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTT 12222 Query 160622 CGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACCGTCTGCTTT-ATTACTGCGTTCG 160680 |||||| | |||||||| || | || |||| || |||| || || | || ||| Sbjct 12221 CGGTGTTATCATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCATCGCTTTCA 12163 Query 160681 TTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGT 160740 | ||||| || || || || ||||| ||||| ||||| || ||| |||||||| | | | Sbjct 12162 TCGCTGCACCTCCAGTTGATATCGATGGTATTCGTGAGCCAGTTTCTGGTTCATTATTAT 12103 Query 160741 ATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 160800 | ||||||||||||||||||||||| ||||||||| | || ||||| |||||| | || | Sbjct 12102 ACGGAAACAACATCATCTCTGGTGCTGTTGTTCCTACATCAAACGCTATTGGTTTACATT 12043 Query 160801 TCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACC 160860 ||||||| |||||||||||| ||||| | ||||| ||| | ||||| ||||||||||||| Sbjct 12042 TCTACCCAATTTGGGAAGCTTCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACC 11983 Query 160861 AACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAAC 160920 || | |||| | |||||| | | || || | ||||||||||||||| || |||||| Sbjct 11982 AATTAATCGTTTGCCACTTCTTCTTAGGTATTTGCTGCTACATGGGTCGTGAATGGGAAT 11923 Query 160921 TTTCCTACCGCCTCGGCATGCG 160942 | || ||||| | || ||||| Sbjct 11922 TATCTTACCGTTTAGGTATGCG 11901 Score = 143 bits (158), Expect = 3e-29 Identities = 115/136 (85%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 160938 ATGCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATT 160996 ||||| || ||||| ||| || || || ||||| || ||||| ||||| | ||||||||| Sbjct 10477 ATGCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCAGTTGCAGCTGCTACTGCAGTATT 10419 Query 160997 CCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGG 161056 | || |||||||| |||| |||||||||||||||||||||||||| | ||||||||||| Sbjct 10418 CATCATCTATCCTATCGGACAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATCTCTGG 10359 Query 161057 TACCTTCAACTTCATG 161072 || |||||||||||| Sbjct 10358 AACTTTCAACTTCATG 10343 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 161422 TCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACG 161481 ||||||||||||| || | | || ||| || || | ||||| ||||| ||| Sbjct 8285 TCAACTTCAACCAATCAGTAGTTGACTCTCAAGGTCGTGTATTAAACACTTGGGCAGACA 8226 Query 161482 TTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCC 161541 | | || ||||||||| | ||||||||||| ||||||||||||||||| |||||||||| Sbjct 8225 TCATCAACCGTGCTAACTTAGGTATGGAAGTTATGCACGAGCGTAATGCGCACAACTTCC 8166 Query 161542 C 161542 | Sbjct 8165 C 8165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559214561290000