Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015-
08-05] 40,243 sequences; 281,270,454 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3618 125 1e-26
seq144 89.7 9e-16
>seq3618
Length=16204
Score = 125 bits (138), Expect = 1e-26
Identities = 74/77 (96%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 222
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 AAAAAGCAACGTCGCTATGAACGCTTAGCTGCCACAAGCCAGTTATCCCTGTGGTAACTT 60
Query 223 TTCTGGCACCTCTAGCC 239
||||| |||||||| ||
Sbjct 61 TTCTGACACCTCTATCC 77
>seq144
Length=45268
Score = 89.7 bits (98), Expect = 9e-16
Identities = 83/104 (80%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
||| ||||||||||| | |||| || | | ||| | || ||||||||||||| || | |
Sbjct 40199 ATGGCGGTCTAAACCAA-CTCATGTGCGCAATTGGCGGATGAACAATCCAACACTGATTG 40141
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163
| || ||| ||| ||||||||||||||| | ||||| |||||||
Sbjct 40140 AGTTTTGCCTCGATATGATAGGAAGAGCTGGCATCGGAGGATCA 40097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854056163808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |