Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq5804 77.0 7e-12 >seq5804 Length=25546 Score = 77.0 bits (84), Expect = 7e-12 Identities = 96/130 (74%), Gaps = 9/130 (7%) Strand=Plus/Plus Query 19 TTCTT--TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||| |||| ||| || || |||||||||||| | || | | ||||| || |||| Sbjct 12644 TTCTTCATCACTCACACGATAT-GGCTGGATCAGGGTCTCCGCGACTGTCCGATCTTCCG 12702 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||| ||||| |||| | |||||| ||||||| ||||||| ||||| |||| Sbjct 12703 AACTGCCGCCTCTCGTA------AGCACCGTGCCTCAGTTGCAGTGTGGCTGATTCTCCT 12756 Query 137 CTCAGACCAG 146 || | ||||| Sbjct 12757 CTTAAACCAG 12766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071568595040