Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq11221 82.4 1e-13 >seq11221 Length=17816 Score = 82.4 bits (90), Expect = 1e-13 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 101 GAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCT 160 ||| ||||| | | || || || || ||||| || || |||||||| || || || ||| Sbjct 11349 GAACGCTTCCT-GAGGGATCTCGACATTGCCAACGCGTTTCATGCGCTTCTTGCCCTCCT 11407 Query 161 TTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||||||||| |||| ||| | ||| || || ||||| |||||||| ||||||| Sbjct 11408 TTTGCTTCTCCAGCAACTTCCTCTTCCGCGACACATCACCTCCGTAGCACTTGGCCA 11464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838062602688