Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq15614 122 3e-25 seq14402 86.0 2e-14 seq6168 82.4 2e-13 >seq15614 Length=6523 Score = 122 bits (134), Expect = 3e-25 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||||||||||||||||||| | || ||||||| ||||||||||||||||| |||||| Sbjct 2198 ACAGGGTCTTCTTTCCCCGCCGTTTATTCCAAGCCTGTTCCCTTGGCTGTGGTCTCGCTA 2139 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGT 385 ||||||||||||| | |||||||||||||| Sbjct 2138 GATAGTAGATAGGAATAGTGGGAATCTCGT 2109 >seq14402 Length=4562 Score = 86.0 bits (94), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||||| ||||| ||||| | | ||| |||||| ||| ||||||| ||||||| Sbjct 721 TAGGGACGAAGGGAAACTCGTGACGGTAGTCACGCGCGTTGCTAGTTAGATGCCGAGGCA 780 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||| | | |||||||| |||||| ||| ||| |||||| Sbjct 781 TTTGGCTACCTTCACAAGGTCATAGTCACTCCCACCGACTACTTGCGCTT 830 >seq6168 Length=8031 Score = 82.4 bits (90), Expect = 2e-13 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGG 128 ||| ||||||||||||||| ||| ||||||||||||||||||||| || ||| ||||||| Sbjct 6425 TTACCAGATGTGCCGCCCCGGCCGAACTCCCCACCTGACAATGTCTTCCACCTGGATCGG 6366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634541946464