Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015-
08-05] 40,243 sequences; 281,270,454 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq15614 122 3e-25
seq14402 86.0 2e-14
seq6168 82.4 2e-13
>seq15614
Length=6523
Score = 122 bits (134), Expect = 3e-25
Identities = 81/90 (90%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||||||||||||||||||| | || ||||||| ||||||||||||||||| ||||||
Sbjct 2198 ACAGGGTCTTCTTTCCCCGCCGTTTATTCCAAGCCTGTTCCCTTGGCTGTGGTCTCGCTA 2139
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGT 385
||||||||||||| | ||||||||||||||
Sbjct 2138 GATAGTAGATAGGAATAGTGGGAATCTCGT 2109
>seq14402
Length=4562
Score = 86.0 bits (94), Expect = 2e-14
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||| ||||| ||||| | | ||| |||||| ||| ||||||| |||||||
Sbjct 721 TAGGGACGAAGGGAAACTCGTGACGGTAGTCACGCGCGTTGCTAGTTAGATGCCGAGGCA 780
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
|||||||||||| | | |||||||| |||||| ||| ||| ||||||
Sbjct 781 TTTGGCTACCTTCACAAGGTCATAGTCACTCCCACCGACTACTTGCGCTT 830
>seq6168
Length=8031
Score = 82.4 bits (90), Expect = 2e-13
Identities = 54/60 (90%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGG 128
||| ||||||||||||||| ||| ||||||||||||||||||||| || ||| |||||||
Sbjct 6425 TTACCAGATGTGCCGCCCCGGCCGAACTCCCCACCTGACAATGTCTTCCACCTGGATCGG 6366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634541946464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |