Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015-
08-05] 40,243 sequences; 281,270,454 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq15932 214 5e-53
seq399 178 4e-42
>seq15932
Length=4164
Score = 214 bits (236), Expect = 5e-53
Identities = 140/153 (92%), Gaps = 1/153 (1%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404
|| ||||||||||||||||||| |||| ||||| |||||| ||||| |||||||||||
Sbjct 1129 CACGTATTAGCTCTAGAATTACTACGGCTATCCGAGTAGTA-GGTACCATCAAATAAACT 1187
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1188 ATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAATCAGCTTATACTTAGACATG 1247
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTA 497
|||||||||||||||||||||||||||||||||
Sbjct 1248 CATGGCTTAATCTTTGAGACAAGCATATGACTA 1280
>seq399
Length=29091
Score = 178 bits (196), Expect = 4e-42
Identities = 169/213 (79%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT---GTGGTA 114
|| ||| ||| | || || |||||||||||||| || ||||||||||| || |||||
Sbjct 21594 CCGCCCTGTGCCAGGCTTTGGTAATTTGCGCGCATGGTGCCTTCCTTGCATCACGTGGTT 21653
Query 115 GCCGTTTCTCAGGCTCCC----TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170
|| |||||||| | ||| |||||||||||| | |||||||| | || ||||||||
Sbjct 21654 GCAGTTTCTCATACACCCCGCCTCTCCGGAATCGGAACCTAATTCTCTGTCACCCGTTGC 21713
Query 171 TACCATGGTAGGCCACTATCCTACCATCGAAAGTTGA--TAGGGCAGAAATTTGAATGAA 228
||||| ||||||| |||||||||| | | |||||| |||| |||||| |||||||||
Sbjct 21714 CACCATAGTAGGCCTCTATCCTACCCGCAACAGTTGATGTAGGTCAGAAAATTGAATGAA 21773
Query 229 CCATCGCCGGC-TCAAGGCCATGCGATTCGTTA 260
|| |||||||| |||||||| ||||| | |||
Sbjct 21774 CCGTCGCCGGCACCAAGGCCAAGCGATACATTA 21806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509792169728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |