Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq6623 233 6e-59 >seq6623 Length=1529 Score = 233 bits (258), Expect = 6e-59 Identities = 254/332 (77%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 164 TGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAA 223 ||||||| ||||||||||||||| |||||| ||| | |||||||| ||||||||||| Sbjct 1082 TGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTCGAGTTAAGTCTTTGAACGAGCGCAA 1023 Query 224 CCCTTAAGCTTAGTTGCCA-TCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAA 282 ||||| || ||| ||| || || | | | | |||| || ||||||||||| ||| Sbjct 1022 CCCTTGTCTTTTGTTACCACTCCTTTA-TGGAGGACTCAAAAGAGACTGCCGGTGT-AAA 965 Query 283 CCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACG 342 ||||||||||| | ||| |||||||| ||| ||||||||||| |||||||||| || Sbjct 964 CCGGAGGAAGGAGAGGATGACGTCAAGTCAGCATGCCCCTTACATCCTGGGCTACACGCG 905 Query 343 TGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGT 402 | |||||||| || |||| || |||||| | |||| | |||||||| ||| | Sbjct 904 TAATACAATGGCTAAGACAATAGGAAGCGAACCTGCGAAGGTGAGCAAATCTAGCAAACT 845 Query 403 TGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAAT 462 | |||||||| ||||| || |||||||||| || ||||||| ||||| ||||||||| Sbjct 844 TAGCCTCAGTTCAGATTGCAGGCTGCAACTCGCCTGCATGAAGCCGGAATTGCTAGTAAT 785 Query 463 CGTAGATCAGC-ATGCTACGGTGAATACGTTC 493 || ||||| || |||||||||||||| Sbjct 784 CGCCAGTCAGCTATATGGCGGTGAATACGTTC 753 Score = 197 bits (218), Expect = 4e-48 Identities = 179/223 (80%), Gaps = 12/223 (5%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1339 CGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTT 1280 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCTCTAGAG 125 |||||||| ||||||||||||||||||||| |||||||| || || || || | Sbjct 1279 TAATTCGATGCAACGCGAAGAACCTTACCAGGACTTGACATGCCACTTTTTCC-CTGAAA 1221 Query 126 ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGT 185 | || ||| | || |||| ||||||| ||||||| |||||||||||||| Sbjct 1220 AGGGAAGTTAC----AGGGTGGAC------ACAGGTGGTGCATGGCTGTCGTCAGCTCGT 1171 Query 186 GTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTT 228 | |||||| ||| | |||||||| |||||||||||||||| Sbjct 1170 GCCGTGAGGTGTAGAGTTAAGTCTTCTAACGAGCGCAACCCTT 1128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503879695040