Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq2383 398 3e-108 >seq2383 Length=7316 Score = 398 bits (440), Expect = 3e-108 Identities = 419/544 (77%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 49 GTTCGCCGAGAAACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTT--- 105 ||| || | |||||||| |||||| | |||| ||||||| ||| ||| || Sbjct 2352 GTTGGCGGCGAAACGGCGC-ACGAAGTCCT-GCAGTTCGGTGA----CGCGTTCCTTGGC 2299 Query 106 CTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTC 165 ||||||||||| | || ||| | ||||||| |||||||| | |||||| ||||| Sbjct 2298 CTTGGCGTTGTTGGCCACCAGGCGTTCGCGGGCCTGGGTCGAGGCCAGCATGTAGTCGTC 2239 Query 166 GTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACAC 225 ||||||||||||| | | ||| | |||||| ||||||||||| ||||||||||| || || Sbjct 2238 GTAGTTGCCCGGGTAGATGCGGATCTCGCCATAGTCCAGGTCGGCCATGTGGGTGCAGAC 2179 Query 226 GCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCT--GGAACGCTGGGTC 283 ||||||||||||||| ||||| ||||||||||||| ||| || | |||| | Sbjct 2178 CTGGTTCAGGAAGTGACGATCGTGGCTGATGATGATCATCGTGCTCTGGTA-GCTGT-TG 2121 Query 284 AGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGC 343 || | |||||||||||||||||||||||||||||| || ||||||||||||||| ||| Sbjct 2120 AGCACGCTTTCCAGCCAGCGGATGGTGTTGATGTCCAGGTTGTTGGTCGGTTCGTCCAGC 2061 Query 344 AACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCC 403 | |||||| || || | || ||||||||||| ||||||| || ||||||||||||||| Sbjct 2060 AGCAGCACGTCCGGGTTCGAGAACAGCGCCTGCGCCAGCAGCACGCGCAGCTTCCAGCCC 2001 Query 404 GGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAGC 463 || | |||||||| |||||| | |||||| |||| | || |||| ||||||||| Sbjct 2000 GGCGCCACTTCGCGCATCGGCAGGTTGTGCTGGTCCACGGCGATTTCCAGGCCCAGCAGC 1941 Query 464 AGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGC 523 ||||| ||||| |||| |||||||||||||||||| |||||||||| || |||||| Sbjct 1940 AGCTCGCCGGCGCGGGCTTCGGCGGTGTAGCCGTCATATTCGGCGAACTTGGCTTCCAGG 1881 Query 524 TCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACGC 583 |||||| || |||| ||| ||||| | |||||| | ||| || | || ||| Sbjct 1880 TCGGCCGCGCGCATGTAGTCGTCTTCCGACGCTTCCGGGTTGGCGTAGATCGCGTCGCGC 1821 Query 584 TCGG 587 |||| Sbjct 1820 TCGG 1817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881444787404