Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq27 116 3e-24 seq3229 96.9 3e-18 seq7039 78.8 7e-13 >seq27 Length=64058 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 15 GATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTATTGCTTGGCCTGTCC 74 || ||| |||||| | |||| |||||||| ||| | || | || ||||||||| Sbjct 37456 GAAGCCGTCGCCCGCATCCGCGAGCAGGTCGGTGAAGACGAAGTCATCCTCGGCCTGTCC 37515 Query 75 GGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTG 134 |||||||| ||||| ||||| | ||||| ||| | |||||||||||||||||||| ||| Sbjct 37516 GGCGGCGTCGACTCGTCGGTGGCCGCGGCCCTGATCCACAAGGCCATCGGCGACCAGCTG 37575 Query 135 ACCTGCGTGTTTGTCGA 151 |||||||| || ||||| Sbjct 37576 ACCTGCGTCTTCGTCGA 37592 >seq3229 Length=5175 Score = 96.9 bits (106), Expect = 3e-18 Identities = 96/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 33 CGCGCCCAGGTCGGCACTGACAACGT-AT-TGCTTGGCCTGTCCGGCGGCGTTGACTCCT 90 ||||||||||| ||||| | ||| || || ||| ||||||||||||||||| || ||| Sbjct 3227 CGCGCCCAGGTGGGCACCGGCAAGGTGATCTGC--GGCCTGTCCGGCGGCGTCGATTCCG 3284 Query 91 CGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTCG 150 |||| | |||| ||| | ||| |||| ||||| || || || ||||||||||| |||| Sbjct 3285 CGGTCGCGGCGGTCCTGATCCACGAGGCGATCGGTGATCAGCTCACCTGCGTGTTCGTCG 3344 Query 151 A 151 | Sbjct 3345 A 3345 >seq7039 Length=1341 Score = 78.8 bits (86), Expect = 7e-13 Identities = 89/116 (77%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 38 CCAGGTCGGCACTGACAACGT-AT-TGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTT 95 |||||||||| | ||| || || ||| ||||| ||||||||||| ||||| |||| Sbjct 1013 CCAGGTCGGCGACGGCAAGGTGATCTGC--GGCCTCTCCGGCGGCGTCGACTCGGCGGTC 956 Query 96 GTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 | |||| ||| | ||| |||| |||||||| || || |||||||| || ||||| Sbjct 955 GCGGCGGTGCTGATCCACGAGGCGATCGGCGAGCAGCTCACCTGCGTCTTCGTCGA 900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383970243720