Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq161 158 3e-36 seq4947 114 3e-23 >seq161 Length=36837 Score = 158 bits (174), Expect = 3e-36 Identities = 293/429 (68%), Gaps = 37/429 (9%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| || |||| ||||| || || | ||||| |||||||| || |||||||||| | Sbjct 22986 CGATCGTGAGCAGGTCGCCACCGACTTCCGTCCAGGCCAGGCCGGTCACCTGACCGATCT 23045 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGT-GCTCCAGG 119 | | | || ||||||| |||| || || | ||||||||||||| | | ||| ||| Sbjct 23046 GGTTTTCCTTTTCGGCCATGCCGAAGGTGTAGCGGCGCACGCCGAGGTAATCGCTG-AGG 23104 Query 120 GAGTCGGCCGTGACCTTCACCGA---------GAAGCGTTTTTCCA---------GCGC- 160 |||| ||||||| || |||| |||| || || || |||| Sbjct 23105 TTGTCGCCCGTGACGTTGACCGGCTTGAGTTCGAAG-GTCTTGCCTTCGGCCTTGGCGCG 23163 Query 161 AT--------GT-------TCCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTC 205 || || | ||||| | |||||||||||||||| | | | ||| || Sbjct 23164 ATCGCTCTGGGTCAGCAACTGCTTGATCACCTTGCGGCAGATCTTGCCCACTTCGCGTTC 23223 Query 206 CAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGAC 265 || ||||||| ||||||||||||||||||||||| ||||||||||| | || || | | Sbjct 23224 GAGCGCACGCACGCCGGCTTCGCGGGTGTAGTAGCGCACGATGTCGCGCAGCGCGCTGTC 23283 Query 266 TTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTA 325 || | | |||| | ||| | ||| ||| | ||| |||||||| || | Sbjct 23284 ATCGACGGTCAGCTCGGTATCCTTGACGCCGTTGTTCTTCATCAGCTTGGGCAGCAGATG 23343 Query 326 CTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCAT 385 | |||||||| |||||| || || |||||||| || | |||||| ||||||||||| Sbjct 23344 GTCACGGGCGATGTGGATCTTTTCTTCCTCGGTGTAGCCGGACAGGCGGATCACTTCCAT 23403 Query 386 CCGGTCCAG 394 |||||||| Sbjct 23404 GCGGTCCAG 23412 >seq4947 Length=2767 Score = 114 bits (126), Expect = 3e-23 Identities = 176/247 (71%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||| || ||||||||| || | |||||| ||||| || ||||| |||||| | Sbjct 551 CGATGGTCAACAGCTCGCCGCCGACATCGGTCCAGGCCAGACCGGTGACGATACCGACCT 492 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 |||||| | ||| | |||| ||| | || | ||||||||||| | || | Sbjct 491 GATCCTCGTCGTCGATCTCGCCGAAGCGATACTTCGGAACGCCGAGGAACTCTTC--GAT 434 Query 121 AGTCG--GCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCAT--GTTCCTTGACCGCC 176 | ||| | |||||||||||| || || || || ||| | ||||| |||||| Sbjct 433 ATTCGCCTCGGTGACCTTCACC--GACTTCTTCTTGGAGATCATCAGCTCCTTCACCGCC 376 Query 177 TTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAG 236 |||||| || | | || || ||||||||| |||||| || ||||||||||||||| Sbjct 375 TTGCGGGCGAGTGTGGAGAGCTCACGCTCCAGGTTACGCACGCCCGCTTCGCGGGTGTAG 316 Query 237 TAGCGGA 243 ||||| Sbjct 315 CGGCGGA 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158307339584