Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq885 196 2e-47 seq5709 131 6e-28 >seq885 Length=16589 Score = 196 bits (216), Expect = 2e-47 Identities = 403/583 (69%), Gaps = 35/583 (6%) Strand=Plus/Plus Query 7 ACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCAC- 65 ||||| | |||| |||||||||| || | || || | |||| | ||||||||| | Sbjct 3938 ACCGTGGTGTTCTGGTCGTTCCGCGTGATGGCGGGGCTGGGCATGCTGATGATCCTGCTG 3997 Query 66 -CGGTCTAGTTCAGC-CAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 ||| || | || | |||| |||| || ||| | | ||||| ||| || Sbjct 3998 GCGGCCTGG----GCGCTGTGGGC-GCGCTGGCGCGGCCGGCTGTACCAGTCGCGCGCGC 4052 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 | | | | | ||| |||||||||| ||||||||| || | || || || |||||||||| Sbjct 4053 TGCAGCGCTTCGCGCTGTGGATGGGGCCGTCCGGGCTGGTGGCCATCCTGGCCGGCTGGT 4112 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATG 243 | || || |||||||| ||||| ||||| ||||| ||| ||||||||||||| || | Sbjct 4113 ACGTGACCGAGATCGGCCGCCAGCCCTGGGTCGTCTATGGCGTGATGCGCACGGCCGACG 4172 Query 244 CGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGT 303 | || || | || |||||| | ||||| | ||||||| | ||||||||| ||||| Sbjct 4173 CCGCCACCCGCCACGGCCTGGGCGAACTGACGCTGACGCTGGCGCTGTTCGTGGCGGTGT 4232 Query 304 AC---TTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTC 360 || |||| ||||||| ||||| || |||||| |||||||| | |||| || | Sbjct 4233 ACCTGTTCG---TGTTCGGCGCCGGCGTGTCGTACATGCTGCGCCTGATCCGCATGGGGC 4289 Query 361 CGCAGACCCACG-AAGGCGATGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCA 419 || | || || ||| | | |||| ||| || || ||| ||| || ||||| Sbjct 4290 CG-ACGCCGGCGCCCGGCCACGCGCCGCTGTCCGGCGGCCCGGGC--GAACCG--CGCCA 4344 Query 420 GCC----CGTCCGTTGTCTGCCGCCGATGATGGCAGCGATGACGACCAC--ACCCACATC 473 ||| || ||| |||| |||| || | | ||| |||| |||| | | || | Sbjct 4345 GCCGTCGCGGCCGCTGTCGGCCG-CGTCCACCTCGGCG--GACG-CCACGTCCGCGCAAC 4400 Query 474 CAGCA---CAAGGGGCAT--TGAGATGGGTATTGATCTTCCGCTGATCCGGGCCGTGATC 528 | | | |||| || | | ||||| || || ||| | |||| ||||||| ||| Sbjct 4401 CTGGATTCAAAGGAGCCTGACGCCATGGGCATCGACCTTGCATTGATATGGGCCGTCATC 4460 Query 529 ATCATCTTCGGCATCATGATGTACGTGGTCATGGACGGCTTCG 571 ||| | |||||| | |||||||||||||| ||||||||||||| Sbjct 4461 ATCCTGTTCGGCGTGATGATGTACGTGGTGATGGACGGCTTCG 4503 >seq5709 Length=2092 Score = 131 bits (144), Expect = 6e-28 Identities = 172/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 15 GTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGT 74 |||| || ||||||| ||| |||||| | ||||||||||| || ||| || || Sbjct 1477 GTTCTGGGCGTTCCGCATCATGGTCGGGCTCGGCTTCCTGATCATGGGGCTCGGCCT-GT 1535 Query 75 TCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTACCTG 134 |||||| | | | |||| || ||| || ||||||| ||| ||| | | | | | Sbjct 1536 TCAGCCTGCTGAT-GCGCTGGCGCGGCATGATGTACCAGTCACAGCTGCTGCATCGCTTC 1594 Query 135 GCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACGGAA 194 ||| || |||||||||| |||| || |||||| | |||||||||||| ||||||| || Sbjct 1595 GCGGTGCTGATGGGCCCGGCCGGCTTCATCGCGGTGCTCGCCGGCTGGATCACCACCGAG 1654 Query 195 ATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTC 250 | ||| || || |||| ||||||||| ||| |||||||| ||||| | |||| Sbjct 1655 ACCGGGCGGCAACCGTTCACGGTCTACGGGCTGCTGCGCACGACGGATTCCGCCTC 1710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724662033248