Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq117 109 1e-21 seq2434 105 1e-20 >seq117 Length=41085 Score = 109 bits (120), Expect = 1e-21 Identities = 246/361 (68%), Gaps = 19/361 (5%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||| ||||| || ||||||||| | || ||| ||||| || || | Sbjct 24554 CGACCGCCTGCGCTTCGTGGCCGAACGCGCCGAGGTCGGCGAAATGCGCGAGGCCGTCTT 24495 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCG-TTCTGCGAGGCCGTGGGCA 119 |||||| ||||| || || ||| |||||||||| | || |||||||| || ||| Sbjct 24494 CGCCGTCACCATGCCGGAACAGCGCGGCAGCTTCC-GCCGCTTCTGCGAACTGGTCGGCG 24436 Query 120 AGCGCCAGATCACCGAATTCAACTACCG--TTTCC-ACTCCGGCAGCGAGGCGCACATCT 176 | ||| ||||||| ||||||||||| ||||| | |||| | || || ||| | | Sbjct 24435 AACGCAGCGTCACCGAGTTCAACTACCGCATTTCCGATTCCGACCGC---GCCCACGTGT 24379 Query 177 TTGTCGGCGTGCAGACCCACCCCGAC-ACCGACCCCCGCAGCGCGCTGATCGCCAGCC-- 233 | |||||| ||||| | | || | |||| ||| || ||||||||||| Sbjct 24378 TCGTCGGCCTGCAG-GTCTCGTCGCCGGCCGAACCCGACA------AGATCGCCAGCCAC 24326 Query 234 -TGACCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCAC 292 | | || || ||| ||| |||||||| | | || |||||||| ||| Sbjct 24325 TTCCGCCGCCATGGCTTCGATACGCTCGACCTGACGCACGACGAAATGGCCAAGACCCAC 24266 Query 293 ATCCGCCATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTC 352 | ||||| ||||||||||||| | ||||| | || | ||| || | | |||||| Sbjct 24265 TTGCGCCACATGGTCGGCGGCCGGTCCGCGCAGGCGCGCGACGAACTGCTCTATCGCTTC 24206 Query 353 G 353 | Sbjct 24205 G 24205 >seq2434 Length=7174 Score = 105 bits (116), Expect = 1e-20 Identities = 245/361 (68%), Gaps = 19/361 (5%) Strand=Plus/Plus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||| ||||| |||||||| || |||||| |||| || | |||||||| | | Sbjct 2445 CGACCGCATGCGCTTCGTGGCGGACCGGGCCGAGGTGGGCGAGGCGCGCGAAGCCGTGTT 2504 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCG-TTCTGCGAGGCCGTGGGCA 119 ||||||||| | |||||| | | |||||||||| | || ||||||| | ||||| Sbjct 2505 CGCCGTGACGCTGCCCGAGGAACGCGGCAGCTTCC-GCCGCTTCTGCGCCGTGATGGGCG 2563 Query 120 AGCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTG 179 |||| | ||||| ||||||||||| || | || || | || | ||| || | Sbjct 2564 CGCGCAGCGTGACCGAGTTCAACTACCGCATCGCCGACGCCAACACCGCCCGCATTTTCG 2623 Query 180 TCGGCGTGCAGA-CCCACCCCGACACCGACCCCCGCAGCGCGCTGATC--GC-CAGCCTG 235 || ||||||||| | | | ||| | ||| ||||| ||| || | ||||| Sbjct 2624 TCAGCGTGCAGATCGCGCGCCG-CGGCGA------GGGCGCGGACATCATGCGCGGCCTG 2676 Query 236 ACCGAGCAG---GGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCAC 292 |||||| || ||| |||| ||||||| | | || || | |||||| |||| Sbjct 2677 ---GAGCAGGAAGGCTTCGCGGTCAGCGACCTGAGCCACAACGAAGTCTCCAAGCAGCAC 2733 Query 293 ATCCGCCATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTC 352 |||||| | ||||| ||||| | || ||| | || ||| | ||||||||||| Sbjct 2734 ATCCGCTACATGGTGGGCGGACGCTCGCCGCTGGCGGGCGGCGAACGGCTGTTCCGCTTC 2793 Query 353 G 353 | Sbjct 2794 G 2794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027117834272