Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq518 149 1e-33 seq4305 129 1e-27 seq151 80.6 6e-13 >seq518 Length=22246 Score = 149 bits (164), Expect = 1e-33 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 153 ACTTCCAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGA 212 || ||||||||||| || ||||||||||||||| ||| || ||||||| |||| Sbjct 2958 ACGTCCAGCATGCGGGCGGTGTTCTCGGCGCGCTCGGTGTAGCGGCACATCCAGAACAGG 2899 Query 213 TCTGCAGCTGTTCTACGCAGCATACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCAC 272 | | || |||| | |||||| | | |||||| ||||||||||||||||| || | Sbjct 2898 TTGTCGGCGGTTCGGCTCAGCATCGTTATTCCTCCAGAACCCAGGTGTCCTTGGTGCCGC 2839 Query 273 CGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCAC 332 |||| || |||||| ||||||||||| || |||||||||||||| || ||| | Sbjct 2838 CGCCCTGGCTGCTGTTGACCACCAGCGAGCCCTCGGTCAGCGCCACGCGGCACAGGCCGC 2779 Query 333 CGGGCACCAGGCGGGTTTCCTTGCCCGAGAGCACGAAGGGTCGCAAGTCG 382 | ||||| |||| | |||||||| | ||||| |||| |||| |||| Sbjct 2778 CCGGCACGGTGCGGATGTCCTTGCCGCACAGCACATAGGGGCGCAGGTCG 2729 >seq4305 Length=3457 Score = 129 bits (142), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 9/229 (4%) Strand=Plus/Plus Query 163 TGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCTGCAGCTG 222 |||| || |||| ||||||||| || | |||||| | || ||| |||| | | |||| | Sbjct 604 TGCGCGCGAGGTACTCGGCGCGTTCGACGTAACGGGCCAGCCAGAACAGGTTTTCAGCGG 663 Query 223 TTCTACGCAGCATAC--TCAGCC-CTC---CACCACCCAGGTGTCCTTGGTTCCACCGCC 276 | | |||||| | ||| | ||| || | ||||||||||||||| || ||||| Sbjct 664 TGCGCGACAGCATGCGTTCAACTACTCGCTCAGTATCCAGGTGTCCTTGGTGCCGCCGCC 723 Query 277 TTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGG 336 || ||| ||||| ||||||||||||||||||||||| |||||||||| || ||||| Sbjct 724 CTGGCTCGAATTGACCACCAGCGAGCCTTCCTTCAGCGCGACGCGGGTCAGCCCGCCGGG 783 Query 337 CACCA-GGCGGGTTTCCT--TGCCCGAGAGCACGAAGGGTCGCAAGTCG 382 ||| | || || | || ||| | ||||||||||| || | |||| Sbjct 784 CACGATGGTGGTGTGGCTGGAGCCGGTCAGCACGAAGGGACGAAGGTCG 832 >seq151 Length=37899 Score = 80.6 bits (88), Expect = 6e-13 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 248 ACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCC 307 || |||||||||||||| | ||||||||| || ||||||||||| ||| |||||| Sbjct 5121 ACGACCCAGGTGTCCTTCGATCCACCGCCCTGGCTGGAGTTGACGACGAGCTGGCCTTCG 5062 Query 308 TTCAGCGCCACGCGGGTCAAGCCACCGGG 336 ||||||||||||||| | || ||||| Sbjct 5061 GGCAGCGCCACGCGGGTGAGACCGCCGGG 5033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119910411200