Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq125 159 8e-37 seq6623 147 5e-33 >seq125 Length=40541 Score = 159 bits (176), Expect = 8e-37 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGG 189 ||||| ||||| ||| | || |||||| ||||||||| | ||||||| || Sbjct 37242 TGGCTTAACCCTGGGCCGGCAGGAGAAACTCTTAGGCTAGAGTTTGGTAGGGGCAGAGGG 37183 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||||| ||| |||||||||||||||||| || |||||||||||| |||||| || Sbjct 37182 AATTCCCGGTGGAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAAAGGCGAAAGCAC 37123 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 |||||| | |||||||||||||| |||||||| |||||||||| |||||||||| Sbjct 37122 TCTGCTGGGCCATAACTGACACTGAGAGACGAAAGCGAGGGGAGCAAAAGGGATTAGATA 37063 Query 310 CCCTGGTAGTCCACGCCG 327 ||| ||||||| ||||| Sbjct 37062 CCCCTGTAGTCCTCGCCG 37045 >seq6623 Length=1529 Score = 147 bits (162), Expect = 5e-33 Identities = 143/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAG 284 |||||||||||| |||||| || |||||| | |||||||||||||| |||||| Sbjct 1527 GGAGGAACACCAAAGGCGAAAGCACTCTGCTGGGCCATAACTGACACTGAGAGACGAAAG 1468 Query 285 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344 || |||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||| Sbjct 1467 CGAGGGGAGCAAAAGGGATTAGATACCCCTGTAGTCCTCGCCGTAAACGATGGATACTAG 1408 Query 345 GTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGG 404 |||| || | ||| | | || || ||| ||||| |||||| || ||||||| Sbjct 1407 GTGTTGGATAGGTTAAAGTATTCAGTATCGTAGCTAACGCGTGAAGTATCCCGCCTGGGG 1348 Query 405 AGTA 408 |||| Sbjct 1347 AGTA 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203103756032