Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3148 262 1e-67 >seq3148 Length=5372 Score = 262 bits (290), Expect = 1e-67 Identities = 231/282 (82%), Gaps = 12/282 (4%) Strand=Plus/Plus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 |||| |||||| |||||||| |||||| |||| | ||||||||||||||||||| | Sbjct 1 TTTGTTCTACACGAGATTTCCGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTT 60 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGG 128 ||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||||| Sbjct 61 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCACCTGGATCGG 120 Query 129 C--CCGCGAAGG--ACCTTAACGCCAGAA-AATGGTCGGTGAAGACCAG-TTCCGCTTCA 182 | | |||||| |||| ||| |||| | || ||| || || | ||| ||| Sbjct 121 CGTGCCCGAAGGCCGCCTTGGCGCTAGAAGCAGGGACGG---AGTCCCGCCTCCAACTCA 177 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 | || ||||||||| |||| |||| ||||||||||||||| |||||||| ||||||| Sbjct 178 TGGAATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCA 234 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG 284 ||||||||||||||| ||||||||||||||||||||||||| Sbjct 235 CTTATTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAG 276 Score = 86.0 bits (94), Expect = 2e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342 |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 712 AGAGTCAAACTCAACAGGGTCTTCTTTCCCCGCTGTTTTTTCCAAGCCCGTTCCCTTGGC 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635069200352