Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq5 232 2e-56 >seq5 Length=148305 Score = 232 bits (256), Expect = 2e-56 Identities = 261/344 (76%), Gaps = 4/344 (1%) Strand=Plus/Minus Query 12175 GACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCG 12234 || ||| | |||||| || | |||||||| ||| ||||||||| |||||| ||||| | Sbjct 31304 GAGACCGTCATCACCGTCGTGGGCAACCTCACGGCCGACCCCGAGCTGCGGTACACGCAG 31245 Query 12235 GCCGGTGCTGCC-GTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCA 12293 ||| |||||| ||||| ||||||||| ||||||| || || |||||||||||| || Sbjct 31244 AACGG-GCTGCCCGTCGCGAACTTCACCATCGCGTCGACCCCCCGCACGTTCGACCGTCA 31186 Query 12294 GGCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTGTGGCGTGAGGC 12353 ||||||||||||||||||||| ||||| |||||| |||| ||| ||||||||| Sbjct 31185 GGCGAACGAGTGGAAGGACGGCGAGGCCCTGTTCCTGCGGGCGTCGGTCTGGCGTGAGTT 31126 Query 12354 CGCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCT 12413 ||||||| |||| || | || | |||| || ||||||| ||||| || Sbjct 31125 CGCCGAGCACGTGGCGGGTTCGCTGACCAAGGGCAGCCGTGTCATCGCGACCGGTCGTCT 31066 Query 12414 CAAGTC-CCGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGG 12472 ||| ||| ||| | || ||||| ||| ||| || |||| ||||||||| |||| Sbjct 31065 -GCGTCAGCGCTCCTACCAGGACCGTGACGGGCAGACCCGCACCGCCATCGAACTCGAGG 31007 Query 12473 TCGACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCCACCGTG 12516 | |||||||||||||| |||||||||||||| ||||| || ||| Sbjct 31006 TGGACGAGATCGGCCCGAGCCTCCGCTACGCGACCGCGACGGTG 30963 Score = 158 bits (174), Expect = 3e-34 Identities = 484/733 (66%), Gaps = 48/733 (7%) Strand=Plus/Minus Query 16257 GCGCGTCAACATCTGGCACGGCGCCGTCCGCTCTGGCAAGACCATCGGCTCCCTCGTCGC 16316 |||||| ||||||| | ||||| |||| || || ||||| |||| || || | Sbjct 26898 GCGCGTGAACATCTTCGAGGGCGCGATCCGGTCGGGGAAGACGATCGTGTCGCTGCTGCG 26839 Query 16317 CTTCCTTGCCGGTGTCGCAGCCGCCCCCGAACAG-GGCGAGATCGTCGTCATCGGCCGCA 16375 ||||| | || || || | | ||| | |||| |||||| ||| ||| |||| Sbjct 26838 GTTCCT----GATGGCGGTGCTGTTCGCGACTGGCGGCGCGATCGTGGTCGTCGCACGCA 26783 Query 16376 CTCGAGACACCATCTACCGCAACCTCATCGGGCCACTGCAAAACGTCGCGA-TGTACGGG 16434 | || || | ||||| ||| | | | ||| ||| | || || | ||| ||| Sbjct 26782 CCCGCGATTCGGCGTACCGGAACGTGTTTGAGCCGCTG-ATGACTCCGGGCCTGTTCGGT 26724 Query 16435 ACGATGGTCGAGCACATCCGCTACAACCGCGGAGCACCGACCGCCGAAATCTTCGGCCGC 16494 || | | || | | | ||||| | |||||| ||||| || | ||| |||||||| Sbjct 26723 CCGCTCGCACGGCTCGTGCACTACACCGCCGGAGCGCCGACAGCGAAGATCCTCGGCCGC 26664 Query 16495 ACCGTCCACGTCATCGGCGCATCTGACGTCCGA--TCCGAGGCCGTCATCCGAGGCATGA 16552 ||||| |||||| ||||||| || | ||| |||||| || |||| ||| | | Sbjct 26663 ACCGTGCACGTCCTCGGCGCGAACGATG--CGAAGTCCGAGAAGGTGCTCCGCGGCCTCA 26606 Query 16553 CGATCTCGCTGGCCTACCTCGACGAGACCACACTCGTCGCCGAGGAGTTCTTCAACCAGC 16612 | || |||| |||||| |||||||| ||| || || ||||||||||||||| |||| Sbjct 26605 CCGTCGCGCTCGCCTACGTCGACGAGGTCACCGTCATCCCCGAGGAGTTCTTCACGCAGC 26546 Query 16613 TCGTCGCCCGCATGT--CCGTCCCGGGATCACGGA--TCTTCACCACGACGAACCCAGAT 16668 || ||| |||||||| ||| | || | || | | ||| ||| |||||||| || Sbjct 26545 TCCTCGGCCGCATGTCGCCGCCACGAG----CGAAACTGTTCGGCACCACGAACCCGGAC 26490 Query 16669 GGGCCGCGTCACTGGCTGAAGGTGAACTACATCGACCGC----GCCGAAGAGCGCGGCCA 16724 |||| ||||||||||||| ||| | | |||||||| |||| || | |||| Sbjct 26489 TCGCCGGCGCACTGGCTGAAGGCGAAGTTCCTCGACCGCATCGGCCG-CGA-CCTGGCCG 26432 Query 16725 TAAGGTGTTC----CACTTCAACCTTGAGGACAACCGGGCATACCTGCCTGAGGGGTACA 16780 || | || ||||||| || || ||||||| ||| ||| |||| || | Sbjct 26431 GGTGGCGGTCGTGGCACTTCACGCTCGACGACAACCCGGC---CCT---CGAGGAGT-CG 26379 Query 16781 TCGAGGGCCTAG----AGGCTCAGTACACAGGCCTGTGGCACGACCGCTTCGTCAAGGGC 16836 | | ||| || |||| ||| ||| ||||| ||| || ||| ||||| ||||| Sbjct 26378 TATAAGGCGCAGATCAAGGCCGAGTTCACGGGCCTCTGGTACCGCCGATTCGTGCAGGGC 26319 Query 16837 TTGTGGACGATGGCGGACGGCGTCATCTACGAGTGCTTCGACCCGGCCCGGCATGTGGTC 16896 |||| | || || |||| |||| ||| | || || | ||| |||| Sbjct 26318 GAGTGGGTGGCCGCCGAGGGCGCGATCTTCGACATGTGGGATCCCAACGTGCACACGGTC 26259 Query 16897 -------GACACGCTCCCGACGATGCAGCGTGTGCTCGCCGTCGGCGTCGACTACGGCAC 16949 | || |||||| ||||| | | ||||||||||||||||||||||||| Sbjct 26258 CCGTGGGAAGACCTTCCCGA-GATGCGGGAGCTCATCGCCGTCGGCGTCGACTACGGCAC 26200 Query 16950 CACCAACCCGACC 16962 || ||||||||| Sbjct 26199 GACGAACCCGACC 26187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126183212954568