Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ettlia_20oleoabundans_20[genbank_20GCA_5F001937085.1_202017-01-05] 7,999 sequences; 59,279,863 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6682 114 5e-20 seq1072 102 3e-16 >seq6682 Length=1498 Score = 114 bits (126), Expect = 5e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 349089 TGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCT 349148 |||| | |||| ||||||||||| |||||||| | || || |||||||||||||| | Sbjct 646 TGAGCCGCGGCACACCCAGGGTCACATTCTTGGCGGACACACCAGCAAAGTGGAAGGTGT 587 Query 349149 GGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCT 349208 |||||||| ||| ||| ||||||||| ||| ||||| |||| | | |||| || | || Sbjct 586 TGAGGGTCATCTGGGTGGTGGGCTCGCCAATGGACTGGGCCGCCACGGTGCCCACAACCT 527 Query 349209 CGCCGGGCGCGGCAAA 349224 | ||||| ||||| || Sbjct 526 CTCCGGGGGCGGCCAA 511 >seq1072 Length=14767 Score = 102 bits (112), Expect = 3e-16 Identities = 204/294 (69%), Gaps = 30/294 (10%) Strand=Plus/Minus Query 88881 CGCGAGGGCCTGCTCAGGAACCGGTACCAGACAAGCACTCTGGCCAGGACCTTCATCATG 88940 ||||| |||||| ||| |||||| ||| || |||| | |||||||||||| Sbjct 12901 CGCGAAGGCCTGATCAAGAACCGCTACG----------TC-GGCC-GCACCTTCATCATG 12854 Query 88941 GCCGATGCCGAGAGCCGCGGACGGGCCGT-----GGCGCGC---AAGTTCACCGCCGTGG 88992 ||| ||| || |||| | ||||| || |||| ||| ||| |||| | | Sbjct 12853 CCCG--GCC-AG-GCCGTGC----GCCGTAAATCGGTGCGCCAGAAGCTCAACGCCATCG 12802 Query 88993 GCCGAGAGTGCAGGGACAAGGCCGTGGTCGTGGTGGACGACTCTGTCGTGCGCGGCACCA 89052 || |||| || || |||| |||| | ||||||||||||| ||||||||||||||| Sbjct 12801 GCATGGAGTTCAAGGGCAAGAACGTGCTGCTGGTGGACGACTCCATCGTGCGCGGCACCA 12742 Query 89053 C-ATCCAAGTTCATAATCGACCTCCTTCGCAAGTCTGGCGCCACCAAGGTCTACCTCGCT 89111 | | || | || ||||| | ||| | ||||||| |||||| ||| |||| Sbjct 12741 CCAGCCGCGAG-ATCGTCGACATGGCGCGCGCCGCCGGCGCCAACAAGGTGTACTTCGCC 12683 Query 89112 TCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCATCGACATACCGTCG 89165 || | | || ||| | |||| ||||||||| |||||||||||||| ||| || Sbjct 12682 TCGGCCGCGCCTCCGGTGCGTTTCCCCAACGTCTACGGCATCGACATGCCGACG 12629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084520329746202