Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq156 176 9e-42 seq61 118 2e-24 >seq156 Length=64369 Score = 176 bits (194), Expect = 9e-42 Identities = 155/191 (81%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 || ||| | |||||||| ||| ||| ||| |||| ||| ||||||||||||||| Sbjct 23793 AGGCCTCAGCCTGCTAATTAGTCAGCATCGCACCTGCGGTGCGCGGGCTTCTTAGAGGGA 23734 Query 85 CTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATG 143 |||| ||| | |||| |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 23733 CTATTGGCGTTCAGCCAATGGAAGTATGAGGCGATAACAGGTCTGTGATGCCCTTAGATG 23674 Query 144 TTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAG 203 ||||||||||||||||||||||||||| |||||||| | | ||||||||| || Sbjct 23673 TTCTGGGCCGCACGCGCGCTACACTGATGCGACCAACGAG--CCTATCCTTGGCCGAGAG 23616 Query 204 GTCTGGGTAAT 214 | | ||||||| Sbjct 23615 GCCCGGGTAAT 23605 >seq61 Length=716861 Score = 118 bits (130), Expect = 2e-24 Identities = 103/127 (81%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| ||| ||| ||||| ||| | |||||||| Sbjct 429104 GAACGAGACCTCAGCCTGCTAAATAGTCAGCATCGCACCGGCGGTACGCGGACTTCTTAG 429045 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| ||| | |||| | |||||| |||||| |||| ||||||| ||||||||| Sbjct 429044 AGGGACTATTGGCGTTCAGCCAAAGGAAGTATGAGGCGATAAAAGGTCTGGGATGCCCTT 428985 Query 139 AGATGTT 145 ||||||| Sbjct 428984 AGATGTT 428978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947177522944