Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq9 159 1e-36 seq58 122 3e-25 seq218 96.9 1e-17 >seq9 Length=3103448 Score = 159 bits (176), Expect = 1e-36 Identities = 109/123 (89%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 155 CCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 || ||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 594754 CCTCGTCACCCGTTACCACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCA 594813 Query 215 GAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATC 274 |||||||||||||| ||||| |||| | ||||||| |||||||| ||||||| |||| || Sbjct 594814 GAAATTTGAATGAAACATCGTCGGCACGAGGCCATACGATTCGTGAAGTTATCATGATTC 594873 Query 275 ACC 277 ||| Sbjct 594874 ACC 594876 >seq58 Length=707119 Score = 122 bits (134), Expect = 3e-25 Identities = 86/96 (90%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | || | |||| |||| |||| ||||||||||||| Sbjct 265707 GTACTCATTCCAATTACCAGACGCGAA-GCGCCCGGTATTGTTATT-ATTGTCACTACCT 265764 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 96 |||||||||||||||||||||||||||||||||||| Sbjct 265765 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTG 265800 >seq218 Length=35883 Score = 96.9 bits (106), Expect = 1e-17 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 50 TGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATG 109 || || |||||||||||||||||| | |||| |||| ||||||||||||||||||||||| Sbjct 35227 TGCCAGTACCTCCCCGTGTCGGGACTCGGTAGTTTGAGCGCCTGCTGCCTTCCTTGGATG 35286 Query 110 TGGTAGCCGTTTCTCAGG 127 || | ||| || |||||| Sbjct 35287 TGCTTGCCATTCCTCAGG 35304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510364158208