Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09]
2,373 sequences; 148,806,073 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq8 98.7 4e-15
seq2 84.2 9e-11
>seq8
Length=3622472
Score = 98.7 bits (108), Expect = 4e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065
||||||||||| ||| || | |||||||||||||| | ||| || | ||||| | ||
Sbjct 2647553 GTCATGCGCGAAGGGAAGCCGTGCGGGTTCATGATCAGGTCCGGGCACACGCCGCGCTCG 2647494
Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125
||||||| | |||||| | || | ||| ||||||||||| ||||| |||
Sbjct 2647493 CTGAAGGGGAAGTCCTCCTGCCGCACGATGTTGCCCACCACGCCCTTCTGCCCGTGCCGG 2647434
Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152
|||| ||||||||| ||| ||||||||
Sbjct 2647433 CTGCTGAACTTGTCGCCCAGCTCGGGC 2647407
Score = 93.3 bits (102), Expect = 2e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699
|||||||||| | | | || | |||||||| ||||||| || |||||||||| |||
Sbjct 2648856 GCGCCGTAGGCGATAAGGCAGTCACGCTCCATCTCGCCCAGCCGCAGCCCGCCGTCGCGC 2648797
Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759
| ||||||||||||||||||||| || | | | || |||| |||| ||||
Sbjct 2648796 GAGCGGCCCTCGGTGGGCTGCCGCGTCAGCACCACGCGAGGCCCCCGAGCGCGCGCGTGC 2648737
Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGG 448803
||||| ||| ||| |||||||| ||||| || ||| |||
Sbjct 2648736 ATCTTGTCCAGAACCATGTGCTTGAGCTTCTGGTAGTAGACGGG 2648693
>seq2
Length=6378020
Score = 84.2 bits (92), Expect = 9e-11
Identities = 79/100 (79%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 122094 TGCACTCGAC--CGCCCTGGGCATCGCCTACCTCCACAGCCTGCGACCGGCCATCGTGCA 122151
||| || ||| ||||| ||||| || ||||| ||||||| ||| | | ||||||||||
Sbjct 4422646 TGCGCTGGACTTCGCCCGCGGCATGGCGTACCTGCACAGCCGGCGCCAGCCCATCGTGCA 4422587
Query 122152 CCGCGACATCAAGCCCTCTAACCTGCTGGTGGACGTCAAC 122191
||||||| |||||||| | |||||| || | | || ||||
Sbjct 4422586 CCGCGACCTCAAGCCCGCCAACCTGATGATCGCCGGCAAC 4422547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084674269494654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |