Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gonium_20pectorale_20[genbank_20GCA_5F001584585.1_202016-03-09] 2,373 sequences; 148,806,073 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 4e-15 seq2 84.2 9e-11 >seq8 Length=3622472 Score = 98.7 bits (108), Expect = 4e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||||||||| ||| || | |||||||||||||| | ||| || | ||||| | || Sbjct 2647553 GTCATGCGCGAAGGGAAGCCGTGCGGGTTCATGATCAGGTCCGGGCACACGCCGCGCTCG 2647494 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||| | |||||| | || | ||| ||||||||||| ||||| ||| Sbjct 2647493 CTGAAGGGGAAGTCCTCCTGCCGCACGATGTTGCCCACCACGCCCTTCTGCCCGTGCCGG 2647434 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGC 449152 |||| ||||||||| ||| |||||||| Sbjct 2647433 CTGCTGAACTTGTCGCCCAGCTCGGGC 2647407 Score = 93.3 bits (102), Expect = 2e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 448640 GCGCCGTAGGACTTGAAGGAGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGC 448699 |||||||||| | | | || | |||||||| ||||||| || |||||||||| ||| Sbjct 2648856 GCGCCGTAGGCGATAAGGCAGTCACGCTCCATCTCGCCCAGCCGCAGCCCGCCGTCGCGC 2648797 Query 448700 AACTTGCCCTCGGTGGGCTGCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGC 448759 | ||||||||||||||||||||| || | | | || |||| |||| |||| Sbjct 2648796 GAGCGGCCCTCGGTGGGCTGCCGCGTCAGCACCACGCGAGGCCCCCGAGCGCGCGCGTGC 2648737 Query 448760 ATCTTCTCCGAGGCCAGTTGCTTGAGGCTCTGGAAGAAGAAGGG 448803 ||||| ||| ||| |||||||| ||||| || ||| ||| Sbjct 2648736 ATCTTGTCCAGAACCATGTGCTTGAGCTTCTGGTAGTAGACGGG 2648693 >seq2 Length=6378020 Score = 84.2 bits (92), Expect = 9e-11 Identities = 79/100 (79%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 122094 TGCACTCGAC--CGCCCTGGGCATCGCCTACCTCCACAGCCTGCGACCGGCCATCGTGCA 122151 ||| || ||| ||||| ||||| || ||||| ||||||| ||| | | |||||||||| Sbjct 4422646 TGCGCTGGACTTCGCCCGCGGCATGGCGTACCTGCACAGCCGGCGCCAGCCCATCGTGCA 4422587 Query 122152 CCGCGACATCAAGCCCTCTAACCTGCTGGTGGACGTCAAC 122191 ||||||| |||||||| | |||||| || | | || |||| Sbjct 4422586 CCGCGACCTCAAGCCCGCCAACCTGATGATCGCCGGCAAC 4422547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084674269494654