Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq5383 345 7e-93 >seq5383 Length=566 Score = 345 bits (382), Expect = 7e-93 Identities = 232/259 (90%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 156 CAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 215 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| Sbjct 216 TGGGTGAACAATCCAACACTTTGTGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 275 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 276 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 335 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||| ||||||| ||||||| | ||| || ||| ||||||||||||||||| Sbjct 336 GGTAATTTTTCTGACACCTCTTTCTTCACATACCGAATATAAAAAGGATCGATAGGCCAT 395 Query 275 ACTTTCATGGTTTGTATTC 293 |||||| ||||||| || Sbjct 396 GCTTTCACAGTTTGTAATC 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854351589696