Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq5383 345 7e-93
>seq5383
Length=566
Score = 345 bits (382), Expect = 7e-93
Identities = 232/259 (90%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 156 CAGTAGGATAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 215
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154
||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct 216 TGGGTGAACAATCCAACACTTTGTGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATC 275
Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 335
Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274
||||| ||||||| ||||||| | ||| || ||| |||||||||||||||||
Sbjct 336 GGTAATTTTTCTGACACCTCTTTCTTCACATACCGAATATAAAAAGGATCGATAGGCCAT 395
Query 275 ACTTTCATGGTTTGTATTC 293
|||||| ||||||| ||
Sbjct 396 GCTTTCACAGTTTGTAATC 414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854351589696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |