Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= AAMG01001188.1
Length=621
Score E
Sequences producing significant alignments: (Bits) Value
seq2116 80.6 1e-12
>seq2116
Length=2088
Score = 80.6 bits (88), Expect = 1e-12
Identities = 133/189 (70%), Gaps = 6/189 (3%)
Strand=Plus/Minus
Query 217 GGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCAT---CAGGCTGGA 273
||| ||||||| | |||| || ||||||||||| | || || ||| |||| |||
Sbjct 825 GGTGCACACGCGATCGAGGAGCTGGCGGTCGTGAGACACGACGACCATGGGAAGGC-GGA 767
Query 274 ACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGG 333
||| || ||| |||||||| ||||| | | ||||| ||||||||| ||
Sbjct 766 GCGCCAGG--AGGTGCGCCTCCAGCCACTCGATGGCGCGCACGTCCAGGTGGTTGGTAGG 709
Query 334 TTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAG 393
||||| || | |||||| || ||||| || |||| || | ||||| | || ||||
Sbjct 708 CTCGTCCAGAAGCAGCACGTCGGGATCCTGAAGCAGCACCCGCGCCAGGCACACGCGCAT 649
Query 394 CTTCCAGCC 402
|||||||||
Sbjct 648 CTTCCAGCC 640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1881490056936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |