Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq2116 80.6 1e-12 >seq2116 Length=2088 Score = 80.6 bits (88), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 217 GGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCAT---CAGGCTGGA 273 ||| ||||||| | |||| || ||||||||||| | || || ||| |||| ||| Sbjct 825 GGTGCACACGCGATCGAGGAGCTGGCGGTCGTGAGACACGACGACCATGGGAAGGC-GGA 767 Query 274 ACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGG 333 ||| || ||| |||||||| ||||| | | ||||| ||||||||| || Sbjct 766 GCGCCAGG--AGGTGCGCCTCCAGCCACTCGATGGCGCGCACGTCCAGGTGGTTGGTAGG 709 Query 334 TTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAG 393 ||||| || | |||||| || ||||| || |||| || | ||||| | || |||| Sbjct 708 CTCGTCCAGAAGCAGCACGTCGGGATCCTGAAGCAGCACCCGCGCCAGGCACACGCGCAT 649 Query 394 CTTCCAGCC 402 ||||||||| Sbjct 648 CTTCCAGCC 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881490056936