Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq5092 448 1e-123 >seq5092 Length=635 Score = 448 bits (496), Expect = 1e-123 Identities = 381/465 (82%), Gaps = 22/465 (5%) Strand=Plus/Plus Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 108 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 166 TTGTCACTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 225 Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168 ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| Sbjct 226 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAACCGAACCCTGATTCCCCGTCACCCGTT 285 Query 169 GATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAA 228 || ||||||||||||| ||||||||||||| | |||||||||||||||||||| | |||| Sbjct 286 GAAACCATGGTAGGCCTCTATCCTACCATCCACAGTTGATAGGGCAGAAATTTTATTGAA 345 Query 229 CCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG 288 |||||| || || | ||||||| |||||| |||| |||||| Sbjct 346 ACATCGC--TCTAAATTTAAAACGATTCGAACAGTTATCATGAGTCACCA---------- 393 Query 289 AAGGGCGTTGGTTTTTTATCTAATAAATA--CACCCCTTCCGAA-----GTCGGGGTTTT 341 || | |||||||| |||| ||||||| || | | | || || | ||| | Sbjct 394 AAAGTCGTTGGTTAGAAATCTGATAAATACGCAACACATATAAATATATGT-GCCGTTGT 452 Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATA 400 ||| ||||||||||||||||||| |||| ||||| |||||| | || ||||| | Sbjct 453 ACGCACGTATTAGCTCTAGAATTACTACGGGTATCCGAGTAGTACAATCACCATCAAGGA 512 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAG 459 ||| || |||||| ||||||||||||||||||||||| |||| | | |||||||||||| Sbjct 513 AACTATCACTGATGTAATGAGCCATTCGCAGTTTCACAGTATAATACAGCTTATACTTAG 572 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 573 ACATGCATGGCTTAATCTTTGAGACGAGCATATGACTACTGGCAG 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510314420736