Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_
202014-05-13] 5,666 sequences; 12,373,820 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq5092 448 1e-123
>seq5092
Length=635
Score = 448 bits (496), Expect = 1e-123
Identities = 381/465 (82%), Gaps = 22/465 (5%)
Strand=Plus/Plus
Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 108
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 166 TTGTCACTACCTCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 225
Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168
||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct 226 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAACCGAACCCTGATTCCCCGTCACCCGTT 285
Query 169 GATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAA 228
|| ||||||||||||| ||||||||||||| | |||||||||||||||||||| | ||||
Sbjct 286 GAAACCATGGTAGGCCTCTATCCTACCATCCACAGTTGATAGGGCAGAAATTTTATTGAA 345
Query 229 CCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG 288
|||||| || || | ||||||| |||||| |||| ||||||
Sbjct 346 ACATCGC--TCTAAATTTAAAACGATTCGAACAGTTATCATGAGTCACCA---------- 393
Query 289 AAGGGCGTTGGTTTTTTATCTAATAAATA--CACCCCTTCCGAA-----GTCGGGGTTTT 341
|| | |||||||| |||| ||||||| || | | | || || | ||| |
Sbjct 394 AAAGTCGTTGGTTAGAAATCTGATAAATACGCAACACATATAAATATATGT-GCCGTTGT 452
Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATA 400
||| ||||||||||||||||||| |||| ||||| |||||| | || ||||| |
Sbjct 453 ACGCACGTATTAGCTCTAGAATTACTACGGGTATCCGAGTAGTACAATCACCATCAAGGA 512
Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAG 459
||| || |||||| ||||||||||||||||||||||| |||| | | ||||||||||||
Sbjct 513 AACTATCACTGATGTAATGAGCCATTCGCAGTTTCACAGTATAATACAGCTTATACTTAG 572
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 573 ACATGCATGGCTTAATCTTTGAGACGAGCATATGACTACTGGCAG 617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510314420736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |