Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helicosporidium_20sp._20ATCC_2050920_20[genbank_20GCA_5F000690575.1_ 202014-05-13] 5,666 sequences; 12,373,820 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq74 89.7 2e-12 >seq74 Length=8418 Score = 89.7 bits (98), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||| || ||||| |||| | | ||||||||||||| ||| ||||| ||||| Sbjct 6508 CCGATGGTCATGCGCGAGGGGATGGCGTGGGGGTTGATGATGAGGTCGGGCACGATGCCC 6449 Query 364484 TCAGCGGTAAAGGGCATATCTTC--GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCG 364541 | |||| ||| ||||| || || ||| | | | ||| || ||||| |||||||| Sbjct 6448 TGCGCGGAAAAAGGCATGTCCTCCTGGGTGTA--GGTGATGCCGATGGTGCCCTTTTGTC 6391 Query 364542 CATAGCGAGAAGCAAACTTGTCGCC 364566 | | | || |||||||||||||| Sbjct 6390 CGTGTCTCGAGGCAAACTTGTCGCC 6366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884749565493738