Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq71 75.2 2e-11 >seq71 Length=95661 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||| ||||||| | |||||| || |||||||||||| | |||| ||| ||||| Sbjct 9906 GACCCGAAACCAAGCGATCTAGTCATGAGCAGGTTGAAAAAATGATAACACGTTTTGGAG 9847 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA-GGGGTGAAAGGCC 311 ||||||||| | || | || | |||||||| | | || ||||||||| ||| Sbjct 9846 GACCGAACCCACATCTGTGGCAATAGATGGGGATGACTTGTGACTATGGGGTGAAAAGCC 9787 Query 312 AATCAAACTGGGAAATAGCTCGT 334 |||| | || |||||||||| || Sbjct 9786 AATCGAGCTTGGAAATAGCTGGT 9764 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||| ||||||| | |||||| || |||||||||||| | |||| ||| ||||| Sbjct 84920 GACCCGAAACCAAGCGATCTAGTCATGAGCAGGTTGAAAAAATGATAACACGTTTTGGAG 84861 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA-GGGGTGAAAGGCC 311 ||||||||| | || | || | |||||||| | | || ||||||||| ||| Sbjct 84860 GACCGAACCCACATCTGTGGCAATAGATGGGGATGACTTGTGACTATGGGGTGAAAAGCC 84801 Query 312 AATCAAACTGGGAAATAGCTCGT 334 |||| | || |||||||||| || Sbjct 84800 AATCGAGCTTGGAAATAGCTGGT 84778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972797071872