Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq291 129 3e-28 seq290 129 3e-28 seq288 129 3e-28 seq287 129 3e-28 seq286 129 3e-28 seq157 129 3e-28 seq156 129 3e-28 seq24 129 3e-28 seq249 120 2e-25 >seq291 Length=14816 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 4142 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 4084 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 4083 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 4026 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 14590 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 14532 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 14531 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 14474 >seq290 Length=20300 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 3523 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 3465 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 3464 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 3407 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 13988 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 13930 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 13929 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 13872 >seq288 Length=162339 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 3465 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 3407 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 3406 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 3349 >seq287 Length=34814 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 6775 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 6717 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 6716 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 6659 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 17176 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 17118 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 17117 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 17060 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 27585 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 27527 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 27526 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 27469 >seq286 Length=1206827 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 1203852 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 1203794 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 1203793 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 1203736 >seq157 Length=15948 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 2488 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 2430 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 2429 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 2372 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 12900 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 12842 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 12841 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 12784 >seq156 Length=16859 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 14470 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 14412 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 14411 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 14354 Score = 123 bits (136), Expect = 1e-26 Identities = 98/117 (84%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||||| |||||| || | ||| || Sbjct 3928 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATC--GAAGAAATCCGCC 3871 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 3870 GATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 3814 >seq24 Length=19852 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 15024 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 15082 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 15083 CGATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 15140 Score = 122 bits (134), Expect = 5e-26 Identities = 100/118 (85%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||||| |||||| | || |||||| | Sbjct 4644 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 4702 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| | ||| |||| |||||| |||||||||| ||||||||||| Sbjct 4703 CGATCCCTAGTCGGCATCGGTTATGGTTGAGACTA-GACGGTATCTAATCGTCTTCGA 4759 >seq249 Length=1600264 Score = 120 bits (132), Expect = 2e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATAACATCGCC 59 ||||||||| ||||||||||||| ||| |||||| |||||| | || |||||| | Sbjct 1412491 GAACCCAAAAACTTTGATTTCTCATAAAGTGCCGGCGGAGTCATCGAAGA-AACATCCGC 1412433 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||| |||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 1412432 CGATCCCTAGCCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 1412375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399214390