Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq52 149 9e-34 seq71 100 4e-19 >seq52 Length=149364 Score = 149 bits (164), Expect = 9e-34 Identities = 183/247 (74%), Gaps = 15/247 (6%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| ||| ||||||||||||| || ||| | | ||||| | ||| || Sbjct 112265 TTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATGTTGTCTTAC-GACTTTGCGGA 112323 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 ||||||||||||| ||||||||||| || || ||||||||| | || | || Sbjct 112324 GACCTGTGTTTTTGATAAACAGTCGCCAGGGCCTGGTCACTGCGACCA--AGCAATTGAA 112381 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 ||| || |||||||||||||||||||||||||||| ||||||||||| | Sbjct 112382 ------GTT-ACT-----TGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGT 112429 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 |||||| | |||| | || | |||| |||| ||||||| ||||||||||||||| Sbjct 112430 TCCTTAGAGAGAGTTATCTCGCGCCCCTTGGTATACTCTACCAACCCACCTGTGTCGGTT 112489 Query 242 TACGGTA 248 ||||||| Sbjct 112490 TACGGTA 112496 >seq71 Length=95661 Score = 100 bits (110), Expect = 4e-19 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| ||||||||||| ||||| || ||||||||| ||||| ||| ||| | |||| Sbjct 8632 TTCCAGCACCGGGCAGGTGTCAGACCCTATACATCGTGTTACC-ACTTAGCAGAGTCCTG 8690 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC---TCAACAC 124 |||||||| ||||||||||| ||| || || | ||| | || ||| | || | Sbjct 8691 TGTTTTTAATAAACAGTCGCCACCCCCTCTTTTGTGCCA-CATGGGGAGCCAATAAAAAA 8749 Query 125 GTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC 184 | ||| || || | | |||| | |||||||||||| | | |||||||| |||| Sbjct 8750 TTTTGGCACTTCCA-TGTC-CTCCTTTTTCCGAAGTTACGGAGGTAATTTGCCGAGTTCC 8807 Query 185 TTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | || ||| | | | |||| ||| || || || | ||||| ||||||||||| Sbjct 8808 TTCAACATGATTCTCTCTTA-GCCTGAGTTTTTTCAACAAGTCCACCAGTGTCGGTTTA 8865 Score = 100 bits (110), Expect = 4e-19 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| ||||||||||| ||||| || ||||||||| ||||| ||| ||| | |||| Sbjct 83646 TTCCAGCACCGGGCAGGTGTCAGACCCTATACATCGTGTTACC-ACTTAGCAGAGTCCTG 83704 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGC---TCAACAC 124 |||||||| ||||||||||| ||| || || | ||| | || ||| | || | Sbjct 83705 TGTTTTTAATAAACAGTCGCCACCCCCTCTTTTGTGCCA-CATGGGGAGCCAATAAAAAA 83763 Query 125 GTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC 184 | ||| || || | | |||| | |||||||||||| | | |||||||| |||| Sbjct 83764 TTTTGGCACTTCCA-TGTC-CTCCTTTTTCCGAAGTTACGGAGGTAATTTGCCGAGTTCC 83821 Query 185 TTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTA 243 || | || ||| | | | |||| ||| || || || | ||||| ||||||||||| Sbjct 83822 TTCAACATGATTCTCTCTTA-GCCTGAGTTTTTTCAACAAGTCCACCAGTGTCGGTTTA 83879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694397975173