Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq52 96.9 3e-18 seq71 86.0 6e-15 >seq52 Length=149364 Score = 96.9 bits (106), Expect = 3e-18 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| |||||||||||| |||||||||| ||| ||||| || Sbjct 112370 GGTCGCAGTGACCAGGCCCTGGCGACTGTTTATCAAAAACACAGGTCTCCGCAAAGTCGT 112311 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||| ||| |||||||||||| ||||||||||||||| Sbjct 112310 AAGACAACATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 112265 >seq71 Length=95661 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 8710 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGGGTCTGA 8651 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||| |||| Sbjct 8650 CACCTGCCCGGTGCTGGAAACTTAA 8626 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| ||||||| || | || || ||||||||| ||| Sbjct 83724 GCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGGGTCTGA 83665 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||| |||| Sbjct 83664 CACCTGCCCGGTGCTGGAAACTTAA 83640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476798609681