Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq71 196 1e-47 seq52 149 2e-33 >seq71 Length=95661 Score = 196 bits (216), Expect = 1e-47 Identities = 217/296 (73%), Gaps = 29/296 (10%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || ||||||||||||||| | ||||||||||| | |||| Sbjct 8415 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGCGGGGAAGTCGTG 8474 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 8475 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 8534 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT---------------CGCG 177 |||||||||||||||||| ||| ||| || ||||||| | | Sbjct 8535 GAGTTACGGCCGCCGTTTACTGGGCCTTGCATTGAGAGCTTGTTTACTTCCTAAAACTCA 8594 Query 178 TT--------------AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCAC 223 || | | ||||| | |||| |||| |||||||||||| |||| Sbjct 8595 TTGAATTTTAGGACGAAACGCACCCCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCAG 8654 Query 224 ACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| || || | || ||||||| ||||||||||||||||||||||| Sbjct 8655 ACCCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC 8710 Score = 196 bits (216), Expect = 1e-47 Identities = 217/296 (73%), Gaps = 29/296 (10%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || ||||||||||||||| | ||||||||||| | |||| Sbjct 83429 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGCGGGGAAGTCGTG 83488 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 83489 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 83548 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT---------------CGCG 177 |||||||||||||||||| ||| ||| || ||||||| | | Sbjct 83549 GAGTTACGGCCGCCGTTTACTGGGCCTTGCATTGAGAGCTTGTTTACTTCCTAAAACTCA 83608 Query 178 TT--------------AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCAC 223 || | | ||||| | |||| |||| |||||||||||| |||| Sbjct 83609 TTGAATTTTAGGACGAAACGCACCCCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCAG 83668 Query 224 ACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| || || | || ||||||| ||||||||||||||||||||||| Sbjct 83669 ACCCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC 83724 >seq52 Length=149364 Score = 149 bits (164), Expect = 2e-33 Identities = 214/303 (71%), Gaps = 28/303 (9%) Strand=Plus/Plus Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCT----AAC 186 ||| ||||||||||||||| ||||||||||| || |||||| | | | ||| Sbjct 112197 TATAGTTACGGCCGCCGTTCACCGGGGCTTCAGTCGTCAGCTTCTCCAAAAATGAATAAC 112256 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||||||||||| |||||||||||| ||| ||| || ||| || | Sbjct 112257 CAACTTCTTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATGTTGTCTTACGACT 112316 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC-GGCA- 304 |||| ||| |||||||||| |||||||||||| |||||||| || ||||| ||| Sbjct 112317 TTGCGGAGACCTGTGTTTTTGATAAACAGTCGCCAGGGCCTGGTCACTGCGACCAAGCAA 112376 Query 305 -TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTG 363 ||| ||| ||| ||| | ||||||||||||||||||| | Sbjct 112377 TTGAAGTTA-----------CTT----------GGCACCCCTTCTCCCGAAGTTACGGGG 112415 Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAAC 423 | ||||||| |||||||| ||||| |||| || ||||||||| ||||||| | | Sbjct 112416 TCATTTTGCCGAGTTCCTTAGAGAGAGTTATCTCGCGCCCCTTGGTATACTCTACCAACC 112475 Query 424 CAC 426 ||| Sbjct 112476 CAC 112478 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||||||| ||||||| ||| |||||| Sbjct 110550 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCTGATCGTT 110609 Query 73 ACGCCATTCGTGCAGGTCGGAACTT 97 ||||| ||||||| ||||||||||| Sbjct 110610 ACGCCTTTCGTGCGGGTCGGAACTT 110634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796204992