Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq71 194 4e-47 seq52 179 8e-43 >seq71 Length=95661 Score = 194 bits (214), Expect = 4e-47 Identities = 219/297 (74%), Gaps = 31/297 (10%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||| ||| || | ||||||| | || |||| Sbjct 8415 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGCGGGGAAGTCGTG 8474 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 8475 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 8534 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCT--CTAACA--- 181 ||||||||||||||||||||||| ||| || | |||| | || || |||| | Sbjct 8535 GAGTTACGGCCGCCGTTTACTGGGCCTTGCATTGAGAGCTT-GTTTACTTCCTAAAACTC 8593 Query 182 ---GA----------------------TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCA 216 || ||| |||| ||||||||||||||||| |||| Sbjct 8594 ATTGAATTTTAGGACGAAACGCACCCCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCA 8653 Query 217 GCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 | |||||||||||| || | |||||||||| ||||||||||| ||||||||||| Sbjct 8654 GACCCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC 8710 Score = 194 bits (214), Expect = 4e-47 Identities = 219/297 (74%), Gaps = 31/297 (10%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||| ||| || | ||||||| | || |||| Sbjct 83429 GCATCTTCACGGAGAATTCAATTTCACTGAGATCATGTTGGAGACAGCGGGGAAGTCGTG 83488 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 83489 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 83548 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCT--CTAACA--- 181 ||||||||||||||||||||||| ||| || | |||| | || || |||| | Sbjct 83549 GAGTTACGGCCGCCGTTTACTGGGCCTTGCATTGAGAGCTT-GTTTACTTCCTAAAACTC 83607 Query 182 ---GA----------------------TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCA 216 || ||| |||| ||||||||||||||||| |||| Sbjct 83608 ATTGAATTTTAGGACGAAACGCACCCCTCCTGTTAAGTTTCCAGCACCGGGCAGGTGTCA 83667 Query 217 GCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 | |||||||||||| || | |||||||||| ||||||||||| ||||||||||| Sbjct 83668 GACCCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC 83724 >seq52 Length=149364 Score = 179 bits (198), Expect = 8e-43 Identities = 185/240 (77%), Gaps = 13/240 (5%) Strand=Plus/Plus Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-----ATTGCTCTAA 179 ||||||||||||||||||| || ||||||| ||| | ||||| | || ||| Sbjct 112197 TATAGTTACGGCCGCCGTTCACCGGGGCTTCAGTCGTCAGCTTCTCCAAAAATGAA-TAA 112255 Query 180 CAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 | | | |||||||||| |||| |||||||||||||| || ||| | ||||| |||| Sbjct 112256 CCAACTTCTTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATGTTGTCTTACGAC 112315 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-TGTC 298 || || || ||||||||||||| ||||||||||| |||||| || ||||| || | Sbjct 112316 TTTGCGGAGACCTGTGTTTTTGATAAACAGTCGCCAGGGCCTGGTCACTGCGACCAAGCA 112375 Query 299 ATAGA------CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || || ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 112376 ATTGAAGTTACTTGGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 112435 Score = 95.1 bits (104), Expect = 3e-17 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | |||||||||||| |||||| Sbjct 110550 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCTGATCGTT 110609 Query 67 ACGCCTTTCGTGCGGGTCGGAACTT 91 ||||||||||||||||||||||||| Sbjct 110610 ACGCCTTTCGTGCGGGTCGGAACTT 110634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062396802176