Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq52 251 1e-64 seq71 154 3e-35 >seq52 Length=149364 Score = 251 bits (278), Expect = 1e-64 Identities = 253/324 (78%), Gaps = 16/324 (5%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || || |||||||||||||||||| Sbjct 116800 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAG 116859 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| ||| Sbjct 116860 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 116919 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | ||||||| || |||| ||||||||||| |||||| ||||| ||||||||| | Sbjct 116920 CATTGCCTTGGTGAGCAATTACCTCACCAACTAGCTAATCAGCCGCAAGCCCATCTCTTG 116979 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||| ||| ||| || | ||| | |||||| ||||||||| || Sbjct 116980 GCGAT-----TTTCATCATTTAA-------CTTCTCAG-TATTATGAGGTATTAGCCATC 117026 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||| | || ||| ||||| ||||| || ||||||||||||||||||||| Sbjct 117027 GTTTCCAATGGTTGTCCCTCTCCAAAAGGTAGGTT-CTTACGTGTTACTCACCCGTCCGC 117085 Query 301 CACTAAGCTATATATCCAGCAAGC 324 |||| | || || | |||||||| Sbjct 117086 CACTCA-TTAAAT-TTCAGCAAGC 117107 >seq71 Length=95661 Score = 154 bits (170), Expect = 3e-35 Identities = 136/170 (80%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||| ||| ||| || || |||||||||| | || | | |||| Sbjct 72183 GCTGGATCAGGCTTGCGCCCAGTGTCCAAGATTCCTCACTGCTGCCGCTCGAAAGCGTCT 72124 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||||| ||| |||||||| | |||| |||| |||| Sbjct 72123 GGGCCGTGTCTCAGTCCCAGTGTGGCCGATCATCCTCTCAGATCAGCTAAGGATCTTCGG 72064 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176 ||||| |||| ||| | ||||||||||||||| ||| ||| ||||| Sbjct 72063 CTTGGGAGGCTTTTACCCTACCAACTACCTAATCCTACGCAAGCTCATCT 72014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998396994816