Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq52 192 1e-46 seq71 125 2e-26 >seq52 Length=149364 Score = 192 bits (212), Expect = 1e-46 Identities = 294/411 (72%), Gaps = 20/411 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| || ||||||||| ||| ||| | Sbjct 112726 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCTGACTCACCCTCCATGGACGAACCTAGTG 112785 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 |||| |||| | | ||| | | |||||| |||| | || |||||| ||| Sbjct 112786 GAGGAATCCTTAGGTTTACGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 112845 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC--ACTGAC 175 |||||||||| ||| || ||||| | | || | |||||||| || | | Sbjct 112846 ACATTCTCACTTCCGCTTCG--TCCACGGTT-ACTTACATAACCGCTTCACCCTACAG-C 112901 Query 176 ACGACGCTCCCCTACCCAACC------ACACAGGTTGCCACAGCTTCGGCGGATAACTTA 229 | ||||||||||||| | | | | | ||||||||||||| ||| | ||| Sbjct 112902 AGAACGCTCCCCTACCGATATTTTTTTAAATA---TCCCACAGCTTCGGCAGATCATTTA 112958 Query 230 AGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCA 289 ||| | ||||| ||||||| | | || ||||||||||||||||||||||||| | Sbjct 112959 GTCCCGG--ACATTTTCGGCGCAAGAACGCTCCACCAGTGAGCTATTACGCACTCTTTAA 113016 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 ||| |||||||||| |||| |||||||||||||| | ||| ||| |||||| ||| Sbjct 113017 AGGGTGGCTGCTTCTAAGCAAACCTCCTGGTTGTTTCAGCATTCTCACCTCCTTTGTCAC 113076 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | | | | || || |||||||||||| ||||||||||||||||||||||| Sbjct 113077 TTAATGATCATTTTGGGGCCTTAGCTAGTGATCTGGGCTGTTTCCCTCTCG 113127 >seq71 Length=95661 Score = 125 bits (138), Expect = 2e-26 Identities = 140/186 (75%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-GACCAGTGA 270 ||||||| | | ||| ||| ||| |||||| | || || || | ||||||||| Sbjct 9414 GCTTCGGTGATTTTCTTGAGCTCCGTTACATTTTAGGTGCTACTAGACATAGACCAGTGA 9473 Query 271 GCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA 330 |||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct 9474 GCTATTACGCTTTCTTAAAAGGATGGCTGCTTCCAAGCCTACCTCCTGGTTGTCTTCGCC 9533 Query 331 ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 || |||||| ||||| || | ||| || ||||||| |||||||||||| Sbjct 9534 TAGTAACTTCCTTTACCACTCAGAAAATGCTTTGGAACCTTAGCGTTCGATCTGGGCTGT 9593 Query 391 TTCCCT 396 |||||| Sbjct 9594 TTCCCT 9599 Score = 125 bits (138), Expect = 2e-26 Identities = 140/186 (75%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-GACCAGTGA 270 ||||||| | | ||| ||| ||| |||||| | || || || | ||||||||| Sbjct 84428 GCTTCGGTGATTTTCTTGAGCTCCGTTACATTTTAGGTGCTACTAGACATAGACCAGTGA 84487 Query 271 GCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA 330 |||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct 84488 GCTATTACGCTTTCTTAAAAGGATGGCTGCTTCCAAGCCTACCTCCTGGTTGTCTTCGCC 84547 Query 331 ACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 || |||||| ||||| || | ||| || ||||||| |||||||||||| Sbjct 84548 TAGTAACTTCCTTTACCACTCAGAAAATGCTTTGGAACCTTAGCGTTCGATCTGGGCTGT 84607 Query 391 TTCCCT 396 |||||| Sbjct 84608 TTCCCT 84613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177596455424