Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq52 104 2e-20 seq71 84.2 2e-14 >seq52 Length=149364 Score = 104 bits (114), Expect = 2e-20 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| || ||| || | || ||| ||||||||| Sbjct 114871 CGAGTTGCAGCCTGCAATCCGAACTGAGACCGGGTTTTTGAGGTTGGCTAGCCCTCGCGG 114930 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || | || ||| |||||||| ||||||| |||| | |||||| ||| Sbjct 114931 GGTTGCATCTCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGACGTAAGGGGCAT 114990 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | ||||||||||||||| ||||||||||||| ||||||| Sbjct 114991 GCTGACTTGACGTCATCCTCACCTTCCTCCGGCTTGTCAC 115030 >seq71 Length=95661 Score = 84.2 bits (92), Expect = 2e-14 Identities = 117/162 (72%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATAC-ACTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| |||||| | ||| || || | ||| | |||| ||||| | | Sbjct 73146 TCGAGTTGCAGAGAACAATCTGAACT--GAGACGAGTTTTTAAGATTTGCTCCGATTTTC 73089 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || | | |||| | ||||||| ||||||| ||||| |||||||||| | Sbjct 73088 ATCATTGCTCCTTTTTGTACTCATCATTGTAACACGTGTGTAGCCCAGCCCATAAGGGTC 73029 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||||||||||||| ||||| |||||||| || | |||| Sbjct 73028 ATGAGGACTTGACGTGATCCCTCCCTTCCTCTAGTCTATCAC 72987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415998786970