Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq291 138 1e-30 seq290 138 1e-30 seq288 138 1e-30 seq287 138 1e-30 seq286 138 1e-30 seq157 138 1e-30 seq156 138 1e-30 seq24 138 1e-30 >seq291 Length=14816 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 3794 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 3853 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 3854 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 3910 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 3911 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 3957 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 14242 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 14301 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 14302 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 14358 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 14359 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 14405 >seq290 Length=20300 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 3175 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 3234 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 3235 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 3291 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 3292 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 3338 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 13640 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 13699 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 13700 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 13756 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 13757 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 13803 >seq288 Length=162339 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 3117 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 3176 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 3177 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 3233 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 3234 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 3280 >seq287 Length=34814 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 6428 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 6487 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 6488 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 6544 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 6545 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 6591 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 16828 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 16887 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 16888 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 16944 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 16945 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 16991 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 27237 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 27296 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 27297 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 27353 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 27354 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 27400 >seq286 Length=1206827 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 1203504 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 1203563 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 1203564 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 1203620 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 1203621 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 1203667 >seq157 Length=15948 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 2140 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 2199 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 2200 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 2256 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 2257 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 2303 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 12552 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 12611 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 12612 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 12668 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 12669 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 12715 >seq156 Length=16859 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 3584 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 3643 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 3644 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 3700 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 3701 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 3747 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 14122 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 14181 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 14182 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 14238 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 14239 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 14285 >seq24 Length=19852 Score = 138 bits (152), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 15371 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 15312 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| ||| | |||||||| |||||||| || | ||| ||| Sbjct 15311 GGACT--CTGGCCTATCCTGTTGGTCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 15255 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 15254 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 15208 Score = 131 bits (144), Expect = 2e-28 Identities = 132/167 (79%), Gaps = 5/167 (3%) Strand=Plus/Minus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | |||| |||||||||| |||||||||| | ||| Sbjct 4989 AAATTAGAGTGTTCAAAGCAGGCATACGCTCTGAATACATTAGCATGGAATAACACGATA 4930 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||| | | |||| ||| | | | |||||||| |||||||| || | ||| ||| Sbjct 4929 GGACT--CTGGCCTATCCTGTTG-TCTGTAGGACCGGA-GTAATGATTAAGAGGGACAGT 4874 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 4873 CGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 4827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998507040