Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq52 210 7e-52 seq71 123 8e-26 >seq52 Length=149364 Score = 210 bits (232), Expect = 7e-52 Identities = 395/565 (70%), Gaps = 18/565 (3%) Strand=Plus/Minus Query 4 AGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||| ||| ||||||| |||| | | |||||||||| || |||||||| ||||| Sbjct 113463 AGTCTGAATAGGGCGATGAAGTCATTTTTTCTAGACCCGAACCCGGGTGATCTAACCATG 113404 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| |||| || ||||||||||| || |||||||||||| Sbjct 113403 ACCAGGATGAAGCTTGGGTGACACCAAGTGAAGGTCCGAACCGACCGATGTTGAAAAATC 113344 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 | ||||||| ||||| ||| ||||||| | | | |||| ||| |||||||||||| Sbjct 113343 GGCGGATGAGTTGTGGTTAGCGGTGAAATACCAGTCGAACTCGGAGCTAGCTGGTTCTCC 113284 Query 182 CCGAAAACTATTTAGGTAGTGC-CTCAAGTATCACCATC-GGGGGTAGAGCACTGTTATG 239 |||||| || ||| || || | || | ||| |||||| ||||||||| | Sbjct 113283 CCGAAATGCGTTGAGGCGCAGCGGTCCA-TAAGGCTATCTAGGGGTAAAGCACTGTTTCG 113225 Query 240 GCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC-GCATCAG-TTT 296 | ||| | | ||| ||||||| | | |||||||| |||| | || | | | Sbjct 113224 GTGCGGGCTGCGAAAGCG--GTACCAAATCGTGGCAAACTCTGAATACTAGATATGCTAT 113167 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | | | |||||| |||| | |||| | | | ||||||| || | || || Sbjct 113166 TTATGGGCCAGTGAGACGGTGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCAGAT 113107 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | |||||||||||| |||||| ||||| || || || || || |||| | || Sbjct 113106 CACTAGCTAAGGCCCCAAAATGATCATTAAGT--GACAAAGGAGGTGAGAATGCTGAAAC 113049 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 | | |||| ||| |||| |||||||||| | |||||||||||||||| |||||||| || Sbjct 113048 AACCAGGAGGTTTGCTTAGAAGCAGCCA-CCCTTTAAAGAGTGCGTAATAGCTCACTGGT 112990 Query 477 CGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCA 536 ||| || ||| || ||| || || | ||| | ||| ||||||| ||||||| | Sbjct 112989 GGAGCGTTCTTGCGCCGAAAAT-GTCCGGGACTAAATGATCTGCCGAAGCTGTGGGAT-A 112932 Query 537 TTT---ATATGATCGGTAGGGGAGC 558 ||| | | |||||||||||||| Sbjct 112931 TTTAAAAAAATATCGGTAGGGGAGC 112907 >seq71 Length=95661 Score = 123 bits (136), Expect = 8e-26 Identities = 130/170 (76%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||||||| |||||| |||| |||| |||| | ||||||| ||||| Sbjct 9906 GACCCGAAACCAAGCGATCTAGTCATGAGCAGGTTGAAAAAATGATAACACGTTTTGGAG 9847 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTA-GGGGTGAAAGGCT 153 | |||||||||| ||| | || | |||||||| |||| || ||||||||| || Sbjct 9846 GACCGAACCCACATCTGTGGCAATAGATGGGGATGACTTGTGACTATGGGGTGAAAAGCC 9787 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || | | ||||||||||||||||| ||| ||||| ||||| |||||| || Sbjct 9786 AATCGAGCTTGGAAATAGCTGGTTTTCTGCGAAATCTATTGAGGTAGAGC 9737 Score = 123 bits (136), Expect = 8e-26 Identities = 130/170 (76%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||||||| |||||| |||| |||| |||| | ||||||| ||||| Sbjct 84920 GACCCGAAACCAAGCGATCTAGTCATGAGCAGGTTGAAAAAATGATAACACGTTTTGGAG 84861 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTA-GGGGTGAAAGGCT 153 | |||||||||| ||| | || | |||||||| |||| || ||||||||| || Sbjct 84860 GACCGAACCCACATCTGTGGCAATAGATGGGGATGACTTGTGACTATGGGGTGAAAAGCC 84801 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || | | ||||||||||||||||| ||| ||||| ||||| |||||| || Sbjct 84800 AATCGAGCTTGGAAATAGCTGGTTTTCTGCGAAATCTATTGAGGTAGAGC 84751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689594914304