Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq291 91.5 2e-16 seq290 91.5 2e-16 seq288 91.5 2e-16 seq287 91.5 2e-16 seq286 91.5 2e-16 seq157 91.5 2e-16 seq156 91.5 2e-16 seq24 91.5 2e-16 >seq291 Length=14816 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 8815 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 8871 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 8872 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 8931 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 8932 GGAGCGGGGTCAT 8944 >seq290 Length=20300 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 8194 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 8250 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 8251 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 8310 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 8311 GGAGCGGGGTCAT 8323 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 18661 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 18717 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 18718 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 18777 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 18778 GGAGCGGGGTCAT 18790 >seq288 Length=162339 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 8138 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 8194 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 8195 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 8254 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 8255 GGAGCGGGGTCAT 8267 >seq287 Length=34814 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 1026 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 1082 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 1083 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 1142 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 1143 GGAGCGGGGTCAT 1155 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 11444 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 11500 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 11501 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 11560 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 11561 GGAGCGGGGTCAT 11573 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 21849 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 21905 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 21906 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 21965 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 21966 GGAGCGGGGTCAT 21978 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 32258 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 32314 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 32315 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 32374 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 32375 GGAGCGGGGTCAT 32387 >seq286 Length=1206827 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 1198122 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 1198178 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 1198179 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 1198238 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 1198239 GGAGCGGGGTCAT 1198251 >seq157 Length=15948 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 7163 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 7219 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 7220 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 7279 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 7280 GGAGCGGGGTCAT 7292 >seq156 Length=16859 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 8593 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 8649 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 8650 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 8709 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 8710 GGAGCGGGGTCAT 8722 >seq24 Length=19852 Score = 91.5 bits (100), Expect = 2e-16 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || |||||||| | ||| | |||| |||| || Sbjct 10356 GTACGAGAGGAACCGCCGG-TTCGGA-TAATTGGTAAT-GCGCTCGCCTGAAAAGGCGGT 10300 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| ||||||||||| | || | | | ||||||||||||||||| ||| |||||| | Sbjct 10299 GGCGCAAAGCTACCATCCGTAGGCTAACGACTGAACGCCTCTAAGTCGGAAGCCATGCTA 10240 Query 121 -GAACGGGGTGAT 132 || |||||| || Sbjct 10239 GGAGCGGGGTCAT 10227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197611264