Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq52 765 0.0 >seq52 Length=149364 Score = 765 bits (848), Expect = 0.0 Identities = 767/993 (77%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 || || |||||||||||| || | ||||| | || |||||||||| || || | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 |||||||| ||| | || |||| ||| || | || ||| |||| || ||||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 ||||| || |||||||| |||||||| || || | |||||| | | || || ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 |||||| ||||||| || |||| |||| ||||| || ||| | |||||||| || || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 ||||||||| || || || || |||||| | || || |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | ||| ||| | | ||| | | | | || |||||||||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 | | ||||||||||| |||||| ||||| ||||| || ||||| ||||| ||| | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281 ||||||| || | || || ||||||| ||||||||||| |||| ||||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341 |||||||||||| |||| ||| | ||||||||||| || ||||| ||||||||||| || Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401 ||||| ||||| ||||||||||| ||||| ||||| || | |||||||||||||| || Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461 || || || |||||| | | | | || || || |||| || || ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521 |||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581 |||||| || ||||||||||| || || |||||||| || || | || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641 ||||||||| |||||||| || ||||||||||| | ||| |||| || ||||||||||| Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701 | |||||||||||||||||||| || | | || ||||| | || | ||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761 |||||||||| | | ||||| || || || |||||||| ||||| ||||||||||| Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 160794 |||||||||||| | || | |||| || ||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 338 bits (374), Expect = 7e-88 Identities = 509/714 (71%), Gaps = 16/714 (2%) Strand=Plus/Minus Query 161509 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGG 161568 || ||||| ||||| | || ||||||||| || || |||||||| ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 161569 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCAC 161627 || || || || || || || || || || || || |||| |||||| |||| || || Sbjct 18038 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 17980 Query 161628 GACTTTCGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG-TGCAA 161686 || || | ||| |||||||| ||||| | || ||| ||| | || || || || Sbjct 17979 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 17920 Query 161687 ATTTTCTTA-CAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT 161745 ||||||| |||| || ||| |||||||| | ||||||||||||| || || || Sbjct 17919 --TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCT-TTATTATT 17863 Query 161746 C-TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTG 161804 | | ||||| || || |||||||| |||||| | ||| |||||||| || || || Sbjct 17862 CCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATG 17803 Query 161805 GAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGA 161864 || ||||| || || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct 17802 GACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGA 17743 Query 161865 ACTTGCTCGTCTTATCGGTA----TCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTA 161920 | |||| ||| || ||| | || |||||||| || ||||| || || | || | Sbjct 17742 AATTGCACGT----TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAA 17687 Query 161921 TTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCG 161980 || |||| || || || || | || || ||| | ||||| || |||||||| | Sbjct 17686 TTTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTG 17627 Query 161981 CGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACA 162040 | ||| ||||| ||||| || |||||| | ||| | | ||| | ||||||||||| | Sbjct 17626 CACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATA 17567 Query 162041 ATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGC 162100 | ||||| | || || ||||| ||||||||||| || ||| | | || | |||| | | Sbjct 17566 ACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTAC 17507 Query 162101 TCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAA 162160 | | ||| ||||| || | ||||| ||||| ||||| | | |||||||| |||| Sbjct 17506 TTTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAA 17447 Query 162161 ATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTA 162214 | || ||| |||||| || | || |||| || || || ||||| ||||||| Sbjct 17446 ACACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 338 bits (374), Expect = 7e-88 Identities = 509/714 (71%), Gaps = 16/714 (2%) Strand=Plus/Minus Query 161509 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGCTGG 161568 || ||||| ||||| | || ||||||||| || || |||||||| ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 161569 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCAC 161627 || || || || || || || || || || || || |||| |||||| |||| || || Sbjct 147483 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 147425 Query 161628 GACTTTCGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGG-TGCAA 161686 || || | ||| |||||||| ||||| | || ||| ||| | || || || || Sbjct 147424 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 147365 Query 161687 ATTTTCTTA-CAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT 161745 ||||||| |||| || ||| |||||||| | ||||||||||||| || || || Sbjct 147364 --TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCT-TTATTATT 147308 Query 161746 C-TCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTG 161804 | | ||||| || || |||||||| |||||| | ||| |||||||| || || || Sbjct 147307 CCTTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATG 147248 Query 161805 GAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGA 161864 || ||||| || || ||||| || || ||||||||||| || ||||||||||||||||| Sbjct 147247 GACGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGA 147188 Query 161865 ACTTGCTCGTCTTATCGGTA----TCCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTA 161920 | |||| ||| || ||| | || |||||||| || ||||| || || | || | Sbjct 147187 AATTGCACGT----TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAA 147132 Query 161921 TTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTTCTTCG 161980 || |||| || || || || | || || ||| | ||||| || |||||||| | Sbjct 147131 TTTCTGTATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTG 147072 Query 161981 CGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTTCCACA 162040 | ||| ||||| ||||| || |||||| | ||| | | ||| | ||||||||||| | Sbjct 147071 CACCAAGCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATA 147012 Query 162041 ATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGCTTTGC 162100 | ||||| | || || ||||| ||||||||||| || ||| | | || | |||| | | Sbjct 147011 ACTGGACTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTAC 146952 Query 162101 TCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACAAGCAA 162160 | | ||| ||||| || | ||||| ||||| ||||| | | |||||||| |||| Sbjct 146951 TTTGTGCAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAA 146892 Query 162161 ATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTA 162214 | || ||| |||||| || | || |||| || || || ||||| ||||||| Sbjct 146891 ACACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 215 bits (238), Expect = 6e-51 Identities = 244/323 (76%), Gaps = 3/323 (1%) Strand=Plus/Minus Query 162214 ACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTG 162273 ||||| || |||||||||||||| || || ||| | |||||| ||||| |||||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 162274 CATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATT 162333 || ||||||||| | || ||||| || | ||||| |||| ||| | || ||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 162334 GGACTCGCTCTTAATCTT-CGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGA 162392 || | ||| |||| ||| ||||| || || || || || || || ||||| || ||||| Sbjct 16228 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 16170 Query 162393 GGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGC 162452 ||||||||||||||||| ||||| || || ||||| || || || |||||| ||||||| Sbjct 16169 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 16110 Query 162453 ATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512 ||| |||| | ||||| || ||||| || |||||||||||||||| ||| | || Sbjct 16109 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 16050 Query 162513 TAGAGGTAACGCACTGTGAATGG 162535 | || ||||| || | ||||| Sbjct 16049 ACGTGGAAACGCTCT-TTAATGG 16028 Score = 215 bits (238), Expect = 6e-51 Identities = 244/323 (76%), Gaps = 3/323 (1%) Strand=Plus/Minus Query 162214 ACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTG 162273 ||||| || |||||||||||||| || || ||| | |||||| ||||| |||||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 162274 CATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATT 162333 || ||||||||| | || ||||| || | ||||| |||| ||| | || ||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 162334 GGACTCGCTCTTAATCTT-CGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGA 162392 || | ||| |||| ||| ||||| || || || || || || || ||||| || ||||| Sbjct 145673 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 145615 Query 162393 GGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGC 162452 ||||||||||||||||| ||||| || || ||||| || || || |||||| ||||||| Sbjct 145614 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 145555 Query 162453 ATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCC 162512 ||| |||| | ||||| || ||||| || |||||||||||||||| ||| | || Sbjct 145554 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 145495 Query 162513 TAGAGGTAACGCACTGTGAATGG 162535 | || ||||| || | ||||| Sbjct 145494 ACGTGGAAACGCTCT-TTAATGG 145473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551373925447800