Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq52 776 0.0 >seq52 Length=149364 Score = 776 bits (860), Expect = 0.0 Identities = 759/973 (78%), Gaps = 4/973 (0%) Strand=Plus/Minus Query 188851 TTCTGCGAATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 188910 || || || ||||| || ||| | |||||| | || |||||||||| ||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 188911 ATGATCCCTACGCTTCTCGCTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCACC 188969 ||||||||||| | | | || || || | || ||| |||| ||| |||| || || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 188970 CCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 189029 ||||| || || ||||| ||||| || || || | |||||| | | ||||||||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 189030 CATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCAT 189089 |||||| |||||||| || | || | || ||||| || ||| | ||||||||||| || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 189090 CTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAGT 189149 |||||||| || || || ||||||||| | ||||| |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 189150 CTTCCACTTCCTCATCGGCATCTACGCCTACATGGGTCGTGAGTGGGAACTCTCTTACCG 189209 | ||| ||| || | ||| | | | ||||||||||||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 189210 TCTCGGTATGCGTCCTTGGATCTGCA-TTGCTTACTCTGCACCTGTTGCAGCAGCATCCG 189268 | | |||||||||||||||||| ||| |||||||||| ||||| ||||| ||||| | | Sbjct 85830 TTTAGGTATGCGTCCTTGGATC-GCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 85772 Query 189269 CAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTA 189328 | || || | | ||||| | |||||||||||||||||||| | ||||| || |||| Sbjct 85771 CTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 85712 Query 189329 TCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 189388 || ||| || ||||||| |||| | || |||||||| |||||||||||||| ||||||| Sbjct 85711 TCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACC 85652 Query 189389 CCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATG 189448 | ||||| ||||| || || || ||||| || ||||||||| | ||||| || ||||| | Sbjct 85651 CATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACG 85592 Query 189449 GTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATG 189508 ||||||| || || ||||| | |||||||||| ||||||| ||| || ||| | | Sbjct 85591 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAG 85532 Query 189509 GTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCG 189568 ||||||| || || |||||||||||||| |||||||||||||| |||||||| || |||| Sbjct 85531 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 85472 Query 189569 GTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCG 189628 ||||| | || ||||||||||| || ||||||||||| |||||| | || |||||| | | Sbjct 85471 GTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAG 85412 Query 189629 CTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCA 189688 |||| |||||||| || ||||| ||||| || || | || | || |||||||||| Sbjct 85411 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 85352 Query 189689 ACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACA 189748 || | ||||| ||||||||||| ||||| || | ||| ||||||||||| | |||| Sbjct 85351 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACA 85292 Query 189749 CATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACG 189808 | ||||||||| || |||||||||| |||||||||||||| |||||||||||||||| Sbjct 85291 CTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 85232 Query 189809 CTCACAACTTCCC 189821 ||||||||||||| Sbjct 85231 CTCACAACTTCCC 85219 Score = 361 bits (400), Expect = 7e-95 Identities = 503/702 (72%), Gaps = 2/702 (0%) Strand=Plus/Minus Query 189984 TGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCT 190043 |||||||| | | |||||||||||| || || || || |||||| | || ||||| Sbjct 18095 TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGGTCA 18036 Query 190044 GGATTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACG 190103 || ||| | | || || || || || || ||| ||||||| ||| |||| || || || Sbjct 18035 GGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACTACA 17976 Query 190104 TTTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATTTT 190163 |||| || ||||| || || || | ||| | || | || || |||||| Sbjct 17975 TTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAATTTC 17916 Query 190164 CTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGG 190223 | ||||| ||||| ||||| || || || ||||||||||||| | | | |||||| Sbjct 17915 TTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCTTTGG 17856 Query 190224 GGTCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTT 190283 || || ||| |||||||||||||| | ||| |||||||| || || ||| | ||| Sbjct 17855 GGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGACGTTT 17796 Query 190284 GTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCA 190343 || || || ||||| || || ||||| ||||| || |||||||||||||||||| | ||| Sbjct 17795 GTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAATTGCA 17736 Query 190344 CGTCTCA-TCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 190402 ||| ||| | || || |||||||| || ||||| || || | || || |||| || Sbjct 17735 CGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGTATT 17677 Query 190403 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTT 190462 ||| || || | || |||||| | || ||||| |||||||||| || ||| ||| Sbjct 17676 CGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAGCTT 17617 Query 190463 CGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCT 190522 ||||| || || || ||||| ||| | | ||||| || || |||||||||||||| | Sbjct 17616 TGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGACTTT 17557 Query 190523 GAACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAAT 190582 ||||| ||||| ||||||||||| || ||| | || |||| || ||||| | ||||| Sbjct 17556 AAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGCAAT 17497 Query 190583 CCATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAA 190642 ||||| | |||||||| ||||| | | ||| |||||||| |||||||| || Sbjct 17496 TCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATTCCG 17437 Query 190643 AGCATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGT 190684 || || || | || |||| ||||| || || || ||||| Sbjct 17436 TGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 361 bits (400), Expect = 7e-95 Identities = 503/702 (72%), Gaps = 2/702 (0%) Strand=Plus/Minus Query 189984 TGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCT 190043 |||||||| | | |||||||||||| || || || || |||||| | || ||||| Sbjct 147540 TGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGGTCA 147481 Query 190044 GGATTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACG 190103 || ||| | | || || || || || || ||| ||||||| ||| |||| || || || Sbjct 147480 GGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACTACA 147421 Query 190104 TTTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGGTGCTAATTTT 190163 |||| || ||||| || || || | ||| | || | || || |||||| Sbjct 147420 TTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAATTTC 147361 Query 190164 CTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGG 190223 | ||||| ||||| ||||| || || || ||||||||||||| | | | |||||| Sbjct 147360 TTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCTTTGG 147301 Query 190224 GGTCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTT 190283 || || ||| |||||||||||||| | ||| |||||||| || || ||| | ||| Sbjct 147300 GGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGACGTTT 147241 Query 190284 GTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCA 190343 || || || ||||| || || ||||| ||||| || |||||||||||||||||| | ||| Sbjct 147240 GTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAATTGCA 147181 Query 190344 CGTCTCA-TCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 190402 ||| ||| | || || |||||||| || ||||| || || | || || |||| || Sbjct 147180 CGT-TCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGTATT 147122 Query 190403 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTT 190462 ||| || || | || |||||| | || ||||| |||||||||| || ||| ||| Sbjct 147121 CGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAGCTT 147062 Query 190463 CGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCT 190522 ||||| || || || ||||| ||| | | ||||| || || |||||||||||||| | Sbjct 147061 TGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGACTTT 147002 Query 190523 GAACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAAT 190582 ||||| ||||| ||||||||||| || ||| | || |||| || ||||| | ||||| Sbjct 147001 AAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGCAAT 146942 Query 190583 CCATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAA 190642 ||||| | |||||||| ||||| | | ||| |||||||| |||||||| || Sbjct 146941 TCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATTCCG 146882 Query 190643 AGCATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGT 190684 || || || | || |||| ||||| || || || ||||| Sbjct 146881 TGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 197 bits (218), Expect = 2e-45 Identities = 232/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 190686 ACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTG 190745 ||||| || ||||||||||| ||||| |||||||| || || ||||| | ||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 190746 CATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATT 190805 || ||||||||| | |||||||| || | ||||| |||| | | || ||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 190806 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAA 190865 ||| | ||| | ||| | ||||| ||||| || || || ||||| || | || || ||| Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 190866 GATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCA 190925 ||||| || || || ||||| || ||||||||||| ||||| || |||||| ||||| | Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 190926 TGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCA 190985 ||| |||| || ||||| || ||||| || ||||||| || || || || || ||| Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 190986 AGAGGCAACGCTCT 190999 | || |||||||| Sbjct 16048 CGTGGAAACGCTCT 16035 Score = 197 bits (218), Expect = 2e-45 Identities = 232/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 190686 ACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTG 190745 ||||| || ||||||||||| ||||| |||||||| || || ||||| | ||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 190746 CATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATT 190805 || ||||||||| | |||||||| || | ||||| |||| | | || ||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 190806 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAA 190865 ||| | ||| | ||| | ||||| ||||| || || || ||||| || | || || ||| Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 190866 GATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCA 190925 ||||| || || || ||||| || ||||||||||| ||||| || |||||| ||||| | Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 190926 TGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCA 190985 ||| |||| || ||||| || ||||| || ||||||| || || || || || ||| Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 190986 AGAGGCAACGCTCT 190999 | || |||||||| Sbjct 145493 CGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634077614274000