Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8 241 2e-61 >seq8 Length=1276107 Score = 241 bits (266), Expect = 2e-61 Identities = 202/244 (83%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||| Sbjct 880193 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATTTCAGCATGGAA 880252 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| | ||||||| | | || |||||| |||||| || |||| | ||||||||||| Sbjct 880253 TAACACTATAGGAC-TCCTGTCCTATTTCGTTGGTCTCG-GGACGGGAGTAATGATTAAG 880310 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||| | ||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct 880311 AGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAA 880370 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 880371 GACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTG 880429 Query 315 GGGG 318 |||| Sbjct 880430 GGGG 880433 Score = 241 bits (266), Expect = 2e-61 Identities = 202/244 (83%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||| Sbjct 895375 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATTTCAGCATGGAA 895434 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| | ||||||| | | || |||||| |||||| || |||| | ||||||||||| Sbjct 895435 TAACACTATAGGAC-TCCTGTCCTATTTCGTTGGTCTCG-GGACGGGAGTAATGATTAAG 895492 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||| | ||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct 895493 AGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAA 895552 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 895553 GACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTG 895611 Query 315 GGGG 318 |||| Sbjct 895612 GGGG 895615 Score = 241 bits (266), Expect = 2e-61 Identities = 202/244 (83%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||| Sbjct 922044 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATTTCAGCATGGAA 922103 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| | ||||||| | | || |||||| |||||| || |||| | ||||||||||| Sbjct 922104 TAACACTATAGGAC-TCCTGTCCTATTTCGTTGGTCTCG-GGACGGGAGTAATGATTAAG 922161 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||| | ||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct 922162 AGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAA 922221 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 922222 GACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTG 922280 Query 315 GGGG 318 |||| Sbjct 922281 GGGG 922284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199826112