Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq8 228 3e-57 >seq8 Length=1276107 Score = 228 bits (252), Expect = 3e-57 Identities = 228/297 (77%), Gaps = 19/297 (6%) Strand=Plus/Plus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| ||||||| || |||||||||| | |||||||||||||||||||||||| | || Sbjct 882328 TGGCGGAATGGTTTCAATCGGCCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 882387 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||| ||||||| | | | |||| |||| || Sbjct 882388 CGAGTCGGTGGGTGACAAACCCACGAGGC----GCAAGT-------------AACC--TG 882428 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | ||| |||||||| | |||| | | || | ||||||| ||||||| || Sbjct 882429 ACTGAGCAAATTCGACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 882488 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 882489 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGGTG 882548 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| |||| | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 882549 GAGGCTCGTAGCGATACTGACGTGCAAATCGTTCGTCGGACTTGGGTATAGGGGCGA 882605 Score = 228 bits (252), Expect = 3e-57 Identities = 228/297 (77%), Gaps = 19/297 (6%) Strand=Plus/Plus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| ||||||| || |||||||||| | |||||||||||||||||||||||| | || Sbjct 897510 TGGCGGAATGGTTTCAATCGGCCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 897569 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||| ||||||| | | | |||| |||| || Sbjct 897570 CGAGTCGGTGGGTGACAAACCCACGAGGC----GCAAGT-------------AACC--TG 897610 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | ||| |||||||| | |||| | | || | ||||||| ||||||| || Sbjct 897611 ACTGAGCAAATTCGACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 897670 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 897671 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGGTG 897730 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| |||| | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 897731 GAGGCTCGTAGCGATACTGACGTGCAAATCGTTCGTCGGACTTGGGTATAGGGGCGA 897787 Score = 228 bits (252), Expect = 3e-57 Identities = 228/297 (77%), Gaps = 19/297 (6%) Strand=Plus/Plus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| ||||||| || |||||||||| | |||||||||||||||||||||||| | || Sbjct 924179 TGGCGGAATGGTTTCAATCGGCCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 924238 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||| ||||||| | | | |||| |||| || Sbjct 924239 CGAGTCGGTGGGTGACAAACCCACGAGGC----GCAAGT-------------AACC--TG 924279 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | ||| |||||||| | |||| | | || | ||||||| ||||||| || Sbjct 924280 ACTGAGCAAATTCGACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 924339 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 924340 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGGTG 924399 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| |||| | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 924400 GAGGCTCGTAGCGATACTGACGTGCAAATCGTTCGTCGGACTTGGGTATAGGGGCGA 924456 Score = 217 bits (240), Expect = 6e-54 Identities = 159/185 (86%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 || || | ||||| |||||| |||||||||||||||||| |||| |||||||||||| | Sbjct 882045 GATGCGCTTTCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCGGGAGGTAAATTCC 882104 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 |||||| ||||||||||||| |||||||||||||| ||||||| | || ||||||||| Sbjct 882105 TTCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 882164 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 |||| ||||| |||||||||||||||| || |||||||||||| |||||||| ||| | Sbjct 882165 AAAGACCTTTGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTGAA 882224 Query 206 ACCAG 210 ||||| Sbjct 882225 ACCAG 882229 Score = 217 bits (240), Expect = 6e-54 Identities = 159/185 (86%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 || || | ||||| |||||| |||||||||||||||||| |||| |||||||||||| | Sbjct 897227 GATGCGCTTTCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCGGGAGGTAAATTCC 897286 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 |||||| ||||||||||||| |||||||||||||| ||||||| | || ||||||||| Sbjct 897287 TTCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 897346 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 |||| ||||| |||||||||||||||| || |||||||||||| |||||||| ||| | Sbjct 897347 AAAGACCTTTGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTGAA 897406 Query 206 ACCAG 210 ||||| Sbjct 897407 ACCAG 897411 Score = 217 bits (240), Expect = 6e-54 Identities = 159/185 (86%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 || || | ||||| |||||| |||||||||||||||||| |||| |||||||||||| | Sbjct 923896 GATGCGCTTTCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCGGGAGGTAAATTCC 923955 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 |||||| ||||||||||||| |||||||||||||| ||||||| | || ||||||||| Sbjct 923956 TTCTAAGGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 924015 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 |||| ||||| |||||||||||||||| || |||||||||||| |||||||| ||| | Sbjct 924016 AAAGACCTTTGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTGAA 924075 Query 206 ACCAG 210 ||||| Sbjct 924076 ACCAG 924080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999592450