Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq19 95.1 2e-17 >seq19 Length=72585 Score = 95.1 bits (104), Expect = 2e-17 Identities = 166/247 (67%), Gaps = 25/247 (10%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||| ||| ||||||| ||||| || |||| ||| ||||| | ||| || Sbjct 8564 TTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACGTCGTCTTAC-GACTTTGCGGA 8506 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 ||||||||||||| |||||||||||| | ||| || ||| | || || Sbjct 8505 GACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTTACTGTGGCCCCCTG-------- 8454 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || ||||| | |||| |||||| ||| | |||| |||||||| | Sbjct 8453 ----------------AGGGGCACTCTTTCTTCCGAAGGTACAGAGCCAATTTGCCGAGT 8410 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 |||||| | |||| | || | ||||||| | || ||| |||||||||||||| Sbjct 8409 TCCTTAGAGAGAGTTATCTCGCTCCCCTTAGTTTATTCAACCCACTCACCTGTGTCGGTT 8350 Query 242 TACGGTA 248 ||||||| Sbjct 8349 TACGGTA 8343 Score = 95.1 bits (104), Expect = 2e-17 Identities = 166/247 (67%), Gaps = 25/247 (10%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||| ||| ||||||| ||||| || |||| ||| ||||| | ||| || Sbjct 38579 TTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACGTCGTCTTAC-GACTTTGCGGA 38637 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 ||||||||||||| |||||||||||| | ||| || ||| | || || Sbjct 38638 GACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTTACTGTGGCCCCCTG-------- 38689 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || ||||| | |||| |||||| ||| | |||| |||||||| | Sbjct 38690 ----------------AGGGGCACTCTTTCTTCCGAAGGTACAGAGCCAATTTGCCGAGT 38733 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 |||||| | |||| | || | ||||||| | || ||| |||||||||||||| Sbjct 38734 TCCTTAGAGAGAGTTATCTCGCTCCCCTTAGTTTATTCAACCCACTCACCTGTGTCGGTT 38793 Query 242 TACGGTA 248 ||||||| Sbjct 38794 TACGGTA 38800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694399872187