Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq19 210 6e-52 seq18 147 6e-33 >seq19 Length=72585 Score = 210 bits (232), Expect = 6e-52 Identities = 208/268 (78%), Gaps = 1/268 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||||| | || ||||||| ||||||| ||||||| | |||||| Sbjct 8747 GCATCTTCACAGCTAGTTTTATTTCACCGAGTCTCTCTCTGAGACAGTATCCAGATCGTT 8688 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 8687 ACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTA 8628 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG-CTAACCCCAT 191 | ||||| ||||||||| ||| ||||||| | |||||| || | ||| | Sbjct 8627 TAGTTACTGCCGCCGTTCACCAGGGCTTCAGTTGTTAGCTTCATCAAAGATTGACCAACT 8568 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 ||||||||| ||||| ||||||| |||| ||| ||||||| ||| || ||||| Sbjct 8567 TCTTTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACGTCGTCTTACGACTTTGCG 8508 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||| |||||||||| ||||||||||| Sbjct 8507 GAGACCTGTGTTTTTGGTAAACAGTCGC 8480 Score = 210 bits (232), Expect = 6e-52 Identities = 208/268 (78%), Gaps = 1/268 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||||| | || ||||||| ||||||| ||||||| | |||||| Sbjct 38396 GCATCTTCACAGCTAGTTTTATTTCACCGAGTCTCTCTCTGAGACAGTATCCAGATCGTT 38455 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 38456 ACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTA 38515 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG-CTAACCCCAT 191 | ||||| ||||||||| ||| ||||||| | |||||| || | ||| | Sbjct 38516 TAGTTACTGCCGCCGTTCACCAGGGCTTCAGTTGTTAGCTTCATCAAAGATTGACCAACT 38575 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 ||||||||| ||||| ||||||| |||| ||| ||||||| ||| || ||||| Sbjct 38576 TCTTTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACGTCGTCTTACGACTTTGCG 38635 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||| |||||||||| ||||||||||| Sbjct 38636 GAGACCTGTGTTTTTGGTAAACAGTCGC 38663 >seq18 Length=47425 Score = 147 bits (162), Expect = 6e-33 Identities = 197/272 (72%), Gaps = 9/272 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||| ||| | || ||||||||||||||||| ||||||||| | || Sbjct 8739 TACTCCGCATCTGCACGGAGAATTCAATTTCACTGAGTCCACACTGGAGACAGTGGGGCA 8680 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||| | ||| |||||| | | | ||| | | ||| |||||||||||| ||| || Sbjct 8679 ATCGTTACGTCTTTCATGCAGGCCAGGAATTAGCTGGCAATGAATTTCGCTACTTTATGA 8620 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 ||||| ||||| ||||||||||| || ||| || | ||| | | | || Sbjct 8619 TTGTTATAGTTACAACCGCCGTTTACTAGGCTTTCCATTTGTATCTT----TCAAC--AC 8566 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 || | |||| |||| ||||||||||| ||||| ||||||||| || || | | Sbjct 8565 TCCTT---TTAAACTTCTAGCACCGGGCAGACGTCAGACCCTATACTTCATGTTACCATT 8509 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||||||||| || |||||| |||| ||||| Sbjct 8508 TTGCAGAGTCCTAATTTTTTAGTAAAAAGTCG 8477 Score = 147 bits (162), Expect = 6e-33 Identities = 197/272 (72%), Gaps = 9/272 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||| ||| | || ||||||||||||||||| ||||||||| | || Sbjct 27567 TACTCCGCATCTGCACGGAGAATTCAATTTCACTGAGTCCACACTGGAGACAGTGGGGCA 27626 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||| | ||| |||||| | | | ||| | | ||| |||||||||||| ||| || Sbjct 27627 ATCGTTACGTCTTTCATGCAGGCCAGGAATTAGCTGGCAATGAATTTCGCTACTTTATGA 27686 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 ||||| ||||| ||||||||||| || ||| || | ||| | | | || Sbjct 27687 TTGTTATAGTTACAACCGCCGTTTACTAGGCTTTCCATTTGTATCTT----TCAAC--AC 27740 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 || | |||| |||| ||||||||||| ||||| ||||||||| || || | | Sbjct 27741 TCCTT---TTAAACTTCTAGCACCGGGCAGACGTCAGACCCTATACTTCATGTTACCATT 27797 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||||||||| || |||||| |||| ||||| Sbjct 27798 TTGCAGAGTCCTAATTTTTTAGTAAAAAGTCG 27829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799760448