Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq19 288 2e-75 seq18 163 6e-38 >seq19 Length=72585 Score = 288 bits (318), Expect = 2e-75 Identities = 275/352 (78%), Gaps = 14/352 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||||||||||| | ||||||||| ||| |||||| Sbjct 8747 GCATCTTCACAGCTAGTTTTATTTCACCGAGTCTCTCTCTGAGACAGTATCCAGATCGTT 8688 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 8687 ACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTA 8628 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC------GATTGCTCTAAC 180 ||||||| ||||||||| || |||||| |||| ||||| ||||| || Sbjct 8627 TAGTTACTGCCGCCGTTCACCAGGGCTTCAGTTGTTAGCTTCATCAAAGATTG-----AC 8573 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | | ||||||||| |||| ||||||| |||||| || |||| ||||||| ||||| Sbjct 8572 CAACTTCTTTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACGTCGTCTTACGACT 8513 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | || || ||||||||||||||||||||||||| ||| || || ||| |||| | Sbjct 8512 TTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTTACTGTGGCC---CCC 8456 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||||| | |||| || ||| ||| | | || |||||||||||||||| Sbjct 8455 TGAGGGGCACTCTTTCTTCCGAAGGTACAGAGCCAATTTGCCGAGTTCCTTA 8404 Score = 288 bits (318), Expect = 2e-75 Identities = 275/352 (78%), Gaps = 14/352 (4%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||||||||||| | ||||||||| ||| |||||| Sbjct 38396 GCATCTTCACAGCTAGTTTTATTTCACCGAGTCTCTCTCTGAGACAGTATCCAGATCGTT 38455 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 38456 ACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTA 38515 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC------GATTGCTCTAAC 180 ||||||| ||||||||| || |||||| |||| ||||| ||||| || Sbjct 38516 TAGTTACTGCCGCCGTTCACCAGGGCTTCAGTTGTTAGCTTCATCAAAGATTG-----AC 38570 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | | ||||||||| |||| ||||||| |||||| || |||| ||||||| ||||| Sbjct 38571 CAACTTCTTTAACCTTCTGGCACTGGGCAGGTGTCAGCCCCCATACGTCGTCTTACGACT 38630 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | || || ||||||||||||||||||||||||| ||| || || ||| |||| | Sbjct 38631 TTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGATCTCTTTACTGTGGCC---CCC 38687 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||||| | |||| || ||| ||| | | || |||||||||||||||| Sbjct 38688 TGAGGGGCACTCTTTCTTCCGAAGGTACAGAGCCAATTTGCCGAGTTCCTTA 38739 >seq18 Length=47425 Score = 163 bits (180), Expect = 6e-38 Identities = 261/366 (71%), Gaps = 18/366 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||| ||| | || | ||||||||| ||||| | | ||||||||| | Sbjct 8739 TACTCCGCATCTGCACGGAGAATTCAATTTCACTGAGTCCACACTGGAGACAGTGGGGCA 8680 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||| ||||| ||| || | | | ||| | | ||| |||||||||||| ||| || Sbjct 8679 ATCGTTACGTCTTTCATGCAGGCCAGGAATTAGCTGGCAATGAATTTCGCTACTTTATGA 8620 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 ||||||||||| |||||||||||| ||||| | || || | | | ||| Sbjct 8619 TTGTTATAGTTACAACCGCCGTTTACT-AGGCTT---TCCA----TTTGTATCTTTCAAC 8568 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| |||| |||| |||||||||||| |||||| ||||||| || | || | | | Sbjct 8567 A-CTCCTTTTAAACTTCTAGCACCGGGCAGACGTCAGACCCTATACTTCATGTTACCATT 8509 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA- 299 | ||||| ||| ||||| ||||| ||||| | || ||| | || ||||| Sbjct 8508 TTGCAGAGTCCTAATTTTTTAGTAAAAAGTCG-TCACCCCCATT-TTTG-----TGTCAC 8456 Query 300 TAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | || || ||||||| |||||| |||||| ||||||||||||||||| | | Sbjct 8455 CATACTTGGTTTCCCTTCTTCCTAAGGTACGGGAATATTTTGCCGAGTTCCTTCAATGTG 8396 Query 359 GTTCTC 364 |||||| Sbjct 8395 GTTCTC 8390 Score = 163 bits (180), Expect = 6e-38 Identities = 261/366 (71%), Gaps = 18/366 (5%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||| ||| | || | ||||||||| ||||| | | ||||||||| | Sbjct 27567 TACTCCGCATCTGCACGGAGAATTCAATTTCACTGAGTCCACACTGGAGACAGTGGGGCA 27626 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||| ||||| ||| || | | | ||| | | ||| |||||||||||| ||| || Sbjct 27627 ATCGTTACGTCTTTCATGCAGGCCAGGAATTAGCTGGCAATGAATTTCGCTACTTTATGA 27686 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 ||||||||||| |||||||||||| ||||| | || || | | | ||| Sbjct 27687 TTGTTATAGTTACAACCGCCGTTTACT-AGGCTT---TCCA----TTTGTATCTTTCAAC 27738 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | ||| |||| |||| |||||||||||| |||||| ||||||| || | || | | | Sbjct 27739 A-CTCCTTTTAAACTTCTAGCACCGGGCAGACGTCAGACCCTATACTTCATGTTACCATT 27797 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA- 299 | ||||| ||| ||||| ||||| ||||| | || ||| | || ||||| Sbjct 27798 TTGCAGAGTCCTAATTTTTTAGTAAAAAGTCG-TCACCCCCATT-TTTG-----TGTCAC 27850 Query 300 TAGAC-AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | || || ||||||| |||||| |||||| ||||||||||||||||| | | Sbjct 27851 CATACTTGGTTTCCCTTCTTCCTAAGGTACGGGAATATTTTGCCGAGTTCCTTCAATGTG 27910 Query 359 GTTCTC 364 |||||| Sbjct 27911 GTTCTC 27916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399798144