Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8 331 1e-88 >seq8 Length=1276107 Score = 331 bits (366), Expect = 1e-88 Identities = 231/258 (90%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 880932 CTCGTTGCATTCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 880873 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC-- 120 |||||||||||||||||||||||||||| | ||||||||||||||||||||| || Sbjct 880872 CTGTTATTGCCTCAAACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGTT-GCTG 880814 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || ||| || | |||||||||||| | ||||||||||||||| |||||||| Sbjct 880813 CGCTAAGAGTAG-CG-TACAACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 880756 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 880755 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 880696 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 880695 AAGAGCTCTCAATCTGTC 880678 Score = 331 bits (366), Expect = 1e-88 Identities = 231/258 (90%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896114 CTCGTTGCATTCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 896055 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC-- 120 |||||||||||||||||||||||||||| | ||||||||||||||||||||| || Sbjct 896054 CTGTTATTGCCTCAAACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGTT-GCTG 895996 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || ||| || | |||||||||||| | ||||||||||||||| |||||||| Sbjct 895995 CGCTAAGAGTAG-CG-TACAACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 895938 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895937 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 895878 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 895877 AAGAGCTCTCAATCTGTC 895860 Score = 331 bits (366), Expect = 1e-88 Identities = 231/258 (90%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 922783 CTCGTTGCATTCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 922724 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC-- 120 |||||||||||||||||||||||||||| | ||||||||||||||||||||| || Sbjct 922723 CTGTTATTGCCTCAAACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGTT-GCTG 922665 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | || ||| || | |||||||||||| | ||||||||||||||| |||||||| Sbjct 922664 CGCTAAGAGTAG-CG-TACAACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 922607 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 922606 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 922547 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 922546 AAGAGCTCTCAATCTGTC 922529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799853339