Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq18 114 1e-23 seq19 107 2e-21 >seq18 Length=47425 Score = 114 bits (126), Expect = 1e-23 Identities = 124/162 (77%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTG-GGATTAGCTCCCCCTCGC 59 |||||||||||| |||||| | ||||||| | ||| | ||||| ||||| || | Sbjct 5672 TCGAGTTGCAGAGAACAATCTGAACTACGA--CGGTTTTTAAGGATTTGCTCCATGTCAC 5615 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || || | || | |||||||| ||||||| ||||| ||||||||||||| Sbjct 5614 CATATTGCCACCTTTTGCTTCCGCCATTGTAGCACGTGTGTAGCCCAACCCATAAGGGCC 5555 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||||||||||| ||||||||||| || |||||| Sbjct 5554 ATGCGGACTTGACGTCATCCTCACCTTCCTCCCGTATGTCAC 5513 Score = 114 bits (126), Expect = 1e-23 Identities = 124/162 (77%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTG-GGATTAGCTCCCCCTCGC 59 |||||||||||| |||||| | ||||||| | ||| | ||||| ||||| || | Sbjct 30634 TCGAGTTGCAGAGAACAATCTGAACTACGA--CGGTTTTTAAGGATTTGCTCCATGTCAC 30691 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || || | || | |||||||| ||||||| ||||| ||||||||||||| Sbjct 30692 CATATTGCCACCTTTTGCTTCCGCCATTGTAGCACGTGTGTAGCCCAACCCATAAGGGCC 30751 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||||||||||| ||||||||||| || |||||| Sbjct 30752 ATGCGGACTTGACGTCATCCTCACCTTCCTCCCGTATGTCAC 30793 >seq19 Length=72585 Score = 107 bits (118), Expect = 2e-21 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||||||| ||| |||| ||| || |||| ||| || |||| Sbjct 6259 TCGAGTTGCAGAGTACAATCCGAACTGAGATAGGGTTTTTGAGATTGGCTAGCCTTCGCA 6200 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || || | ||| |||||||||| ||||||| ||||| |||||| || Sbjct 6199 GGATCGCAGCTCATTGTCCCTACCATTGTAGTACGTGTGTAGCCCAGGATGTAAGGGGCA 6140 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 || |||||||| |||||| |||||||||||| Sbjct 6139 TGCTGACTTGACATCATCCACACCTTCCTCCG 6108 Score = 107 bits (118), Expect = 2e-21 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||||||| ||| |||| ||| || |||| ||| || |||| Sbjct 40884 TCGAGTTGCAGAGTACAATCCGAACTGAGATAGGGTTTTTGAGATTGGCTAGCCTTCGCA 40943 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | || || | ||| |||||||||| ||||||| ||||| |||||| || Sbjct 40944 GGATCGCAGCTCATTGTCCCTACCATTGTAGTACGTGTGTAGCCCAGGATGTAAGGGGCA 41003 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 || |||||||| |||||| |||||||||||| Sbjct 41004 TGCTGACTTGACATCATCCACACCTTCCTCCG 41035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415999923430