Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq19 199 7e-49 seq18 93.3 7e-17 >seq19 Length=72585 Score = 199 bits (220), Expect = 7e-49 Identities = 214/282 (76%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCAC--TGGTGTTCC 63 ||||||| || |||||||| || | |||| | |||||||||| ||||||||| Sbjct 5714 GCTTTCGTCTCTGAGCGTCAGGTAAAGCCCAGTACAGTGCCTTCGCCATATTGGTGTTCC 5655 Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123 ||| ||||||||||||||||||||| ||| |||||||| | ||||| | | |||| Sbjct 5654 TCCCGATATCTACGCATTTCACCGCTCCACCGGGAATTCCCTGTACCTCTACTTCCCTCA 5595 Query 124 AGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGC 183 || | | |||||| ||| || | | ||||||||| | ||| ||| ||||| | Sbjct 5594 AGTATAGAAGTTTCCTTTGCTGGATCTCGGTTGAGCCGAGGCATTTAACAAAAGACTTTC 5535 Query 184 CTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243 | | ||||||| | |||||| |||||| | |||| ||||| ||||| ||| ||||| Sbjct 5534 TATACAGCCTACAGACGCTTTACGCCCAATCATTCCGAATAACACTTGCATCCTCCGTAT 5475 Query 244 TACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct 5474 TACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCCTC 5433 Score = 199 bits (220), Expect = 7e-49 Identities = 214/282 (76%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCAC--TGGTGTTCC 63 ||||||| || |||||||| || | |||| | |||||||||| ||||||||| Sbjct 41429 GCTTTCGTCTCTGAGCGTCAGGTAAAGCCCAGTACAGTGCCTTCGCCATATTGGTGTTCC 41488 Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123 ||| ||||||||||||||||||||| ||| |||||||| | ||||| | | |||| Sbjct 41489 TCCCGATATCTACGCATTTCACCGCTCCACCGGGAATTCCCTGTACCTCTACTTCCCTCA 41548 Query 124 AGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGC 183 || | | |||||| ||| || | | ||||||||| | ||| ||| ||||| | Sbjct 41549 AGTATAGAAGTTTCCTTTGCTGGATCTCGGTTGAGCCGAGGCATTTAACAAAAGACTTTC 41608 Query 184 CTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTAT 243 | | ||||||| | |||||| |||||| | |||| ||||| ||||| ||| ||||| Sbjct 41609 TATACAGCCTACAGACGCTTTACGCCCAATCATTCCGAATAACACTTGCATCCTCCGTAT 41668 Query 244 TACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct 41669 TACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCCTC 41710 >seq18 Length=47425 Score = 93.3 bits (102), Expect = 7e-17 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 |||||||||| ||||| |||||| | |||| ||||| |||||| | | ||||||||||| Sbjct 6484 CCTACACGCCATTTACGCCCAATTATTCCGAATAACACTTGCCCCTTCTGTATTACCGCG 6425 Query 251 GCTGCTGGCAC-GTAGTTAGCCGTGGCTTATTC 282 ||||||||||| | ||||||| ||||| ||| Sbjct 6424 GCTGCTGGCACAGATATTAGCCGGGGCTTCTTC 6392 Score = 93.3 bits (102), Expect = 7e-17 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 |||||||||| ||||| |||||| | |||| ||||| |||||| | | ||||||||||| Sbjct 29822 CCTACACGCCATTTACGCCCAATTATTCCGAATAACACTTGCCCCTTCTGTATTACCGCG 29881 Query 251 GCTGCTGGCAC-GTAGTTAGCCGTGGCTTATTC 282 ||||||||||| | ||||||| ||||| ||| Sbjct 29882 GCTGCTGGCACAGATATTAGCCGGGGCTTCTTC 29914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828799847449