Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq19 122 2e-25 seq18 80.6 5e-13 >seq19 Length=72585 Score = 122 bits (134), Expect = 2e-25 Identities = 179/252 (71%), Gaps = 10/252 (4%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||| ||| || || || ||||||||| ||| | | ||||| Sbjct 6779 AGGGCATATGGTGGAGACCTAGGGACCTAGAGCCGATGAAGGGCGTGACAACCGACGATA 6838 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 || ||||||| || | | |||||||||| |||| |||||||||| ||||| Sbjct 6839 TGCCTCGGGGAGC-AGGACGTATGCTTTGATCCGAGGATTCCCGAATGGGGCAACCCAAA 6897 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGC-AAAGCGAACGCGGCGAACTGAAA 179 | ||| | | ||||| ||||| | | |||| ||| || ||||||||| Sbjct 6898 GC--------ATTCCTTCTTGAATTCATAGAGAAGAGAAAGACAACTTGGTGAACTGAAA 6949 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||||| ||||||||||| ||| | |||||||||||||| |||||||| || Sbjct 6950 CATCTTAGTAGCCAAAGGAAAAGAAAGCAAAAGCGATTCCCAAAGTAGCGGCGAGCGGAA 7009 Query 240 TGGGATGAGCCT 251 ||||| ||||| Sbjct 7010 TGGGAACAGCCT 7021 Score = 122 bits (134), Expect = 2e-25 Identities = 179/252 (71%), Gaps = 10/252 (4%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||| ||| || || || ||||||||| ||| | | ||||| Sbjct 40364 AGGGCATATGGTGGAGACCTAGGGACCTAGAGCCGATGAAGGGCGTGACAACCGACGATA 40305 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 || ||||||| || | | |||||||||| |||| |||||||||| ||||| Sbjct 40304 TGCCTCGGGGAGC-AGGACGTATGCTTTGATCCGAGGATTCCCGAATGGGGCAACCCAAA 40246 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGC-AAAGCGAACGCGGCGAACTGAAA 179 | ||| | | ||||| ||||| | | |||| ||| || ||||||||| Sbjct 40245 GC--------ATTCCTTCTTGAATTCATAGAGAAGAGAAAGACAACTTGGTGAACTGAAA 40194 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||||| ||||||||||| ||| | |||||||||||||| |||||||| || Sbjct 40193 CATCTTAGTAGCCAAAGGAAAAGAAAGCAAAAGCGATTCCCAAAGTAGCGGCGAGCGGAA 40134 Query 240 TGGGATGAGCCT 251 ||||| ||||| Sbjct 40133 TGGGAACAGCCT 40122 >seq18 Length=47425 Score = 80.6 bits (88), Expect = 5e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||||||||| |||| || ||||||||||||||||||||||||| |||| || Sbjct 7047 GAACTGAAACATCTTAGTACCTTTAGGAAAAGAAATCAACCGAGATTCCGTGAGTATCGG 7106 Query 231 CGAGCGAAA 239 |||| |||| Sbjct 7107 CGAGAGAAA 7115 Score = 80.6 bits (88), Expect = 5e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||||||||| |||| || ||||||||||||||||||||||||| |||| || Sbjct 29259 GAACTGAAACATCTTAGTACCTTTAGGAAAAGAAATCAACCGAGATTCCGTGAGTATCGG 29200 Query 231 CGAGCGAAA 239 |||| |||| Sbjct 29199 CGAGAGAAA 29191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918399825504